Gene Ajs_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3023 
Symbol 
ID4672042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3189463 
End bp3190620 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content38% 
IMG OID639840073 
Productglycosyl transferase, group 1 
Protein accessionYP_987233 
Protein GI121595337 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATA AAAAACTTCG CATTGCACAT ATTTGTCAAG CGGCTTCTTA TACCGAGGGC 
ATGCTTTATC AAGACAATGT ATTGCCCGAC CTCAACAGAG TTGATGGGCA TGAGGTACTC
ATTGTTGCGG ATTGCACTTG TTATGTAAAT GGAAAGCTCA CAACGGTACC TGAAGAAGAT
AAAAATCTAG AAAATGGTAT TCGTTTGGTG CGGCTTGAGT TTGGCCTGAA ATTTTTGCCT
AACATTATTC GCAACAAAAT CCGCTATGCA CCCAAACTAA AAAAGTTACT GGAAGCTTTT
CAACCAGACG TCATCCTTTA TCATTCTTTG GTTGGCGCAG GGCTTTTGAC TGTGGGTGAC
TACAAAAAAA AATACCCGAA AACTCGCCTT TATTTGGACA GCCATGCGGA CTTCAACAAC
TCCGGGTCGT CATTTTTTTC GCGATGGCTC CAATACAAGA TTTTTAATAG ATTCCTTTGG
GTGTCCATTT CTGGCTCAGT TGAAAAAGTT TTTTATTTAT CAAGTGAGTG TCGGGATTTC
TTGCGTGAGA TGTACAAGAT AGAAGAATCT CGAATGGAGT TTTTTCCATT AGGAGGCTTT
GTTCAGGATG AGGAAAAGAG AAGATCTGCT CGGAGTCGTG TAAGGCAAAA ACATTCTCTT
TCTGAGGATA ATATTGTTTT CATTCATACC GGAAAAATGA ACAAATTGAA GCGCACCTTA
GATGTGATAA ATTCATTTTC CACTATGCCT TATGAAAATT ATCGTCTTTG GCTTGTTGGA
ACATTTGAGG ACGATATTGC TCAAGATGCA AATAGACTAA TTTCAAAGGA TCAACGCATA
AAGTATCTTG GATGGAAATC AGGTGAAGAG TTGATTGATT TCTTGTCTGC AAGTGACTGC
TACCTTCAGC CAGGTTCGCA ATCAGCAACT CTTCAAACAG CTATTTGCTG TGGCTTGCCG
GTAATAGTCT ATCCACACGC GAGTCACTTT GCATATATTA AAAACAATGG TTTTTTTGTA
AAAACATCAA AAGAACTTAG TGAGGCTCTG AGTTGTTTTA AAAATATAGA AAAAAATTCT
GAGCTGGAAA AAGCGTCGTT AGAAGTTGCC AATAATATTT TAGACTATCG AAAATTGGCT
AATCGTCTAT ATTGGTAA
 
Protein sequence
MNNKKLRIAH ICQAASYTEG MLYQDNVLPD LNRVDGHEVL IVADCTCYVN GKLTTVPEED 
KNLENGIRLV RLEFGLKFLP NIIRNKIRYA PKLKKLLEAF QPDVILYHSL VGAGLLTVGD
YKKKYPKTRL YLDSHADFNN SGSSFFSRWL QYKIFNRFLW VSISGSVEKV FYLSSECRDF
LREMYKIEES RMEFFPLGGF VQDEEKRRSA RSRVRQKHSL SEDNIVFIHT GKMNKLKRTL
DVINSFSTMP YENYRLWLVG TFEDDIAQDA NRLISKDQRI KYLGWKSGEE LIDFLSASDC
YLQPGSQSAT LQTAICCGLP VIVYPHASHF AYIKNNGFFV KTSKELSEAL SCFKNIEKNS
ELEKASLEVA NNILDYRKLA NRLYW