| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3022 |
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| Symbol | |
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| ID | 4672452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3188053 |
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| End bp | 3189453 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639840072 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_987232 |
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| Protein GI | 121595336 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGA TCGCCCGGTT GAAAGCGCTC ATCAATCGCC TGCTGCCGCG CGCCTCGTTC
GCGCGCAGTG TGGGGGTGCT GGCGGGTGGC ACTGCGGTTG CTCAGGGCAT GGGAGTGTTG
TCCTTGCCGT TGATTACCCG GCTTTACACA CCGGAAGACT TTAGCGTGTT AGCGGTGTTT
TCGTCCATTG TGGCCATCGT GTCTGTGGCT GCTTGTCTTC GGCTCGAAAT TGCGATTCCG
ATTCCGGAGA CGGATGAGGA TGCAGCCAAC CTTTTGGCGT TGGCCTTGAT CTTTTGCACC
GTCGCGTCAC TAGCGGCCTG TATTGCAATT TGGCTTTTTT CTTCAGAAAT AGTTACCTTG
CTCAGACAGC CAAAAATAGA ACCCTATTTA TGGACTATTC CTCTAGGCAT ATGGCTAACA
AGCTCGTACT CCGCAGTTCA ACTTTGGGCT ACACGAAACA AGCGATTTGT TGCTATTGCA
AGAACACGCA TGGTGCAAAC GCTTGGTAGT GTAGGACTGC AAATTGTTTT AGGTTTAACT
TCTGGAATAG GTGCATTAGG CCTTTTGCTC GGTCAGCTGA TTTATTGCGG CGCAGGGTCT
CTAGGCCTTT TGCGTACTGG CTGGCAGATT GAAAAGAATT TAATCAAAAA AATCAGCTTT
CAGAGCTTAA AGGCTAATTT AGAAAAATAT AAGAAATTCC CAAAGTATTC CACTATTGAG
GGGCTGGCTA ATTGCGCAGC AACTGATGTT CCAATACTGA TAATTAGCTC TTTTGTTGCA
GGGCCTGAAG CAGGATTCTT ATTCCTTGCA ATGAAAGTGA TGATCATTCC CTTGGGATTA
ATTGGTCGAG CTGTCGCCAA CGTGTATCTT TCTCAGGCAG CTGAAAAGCA CCGTCAGGGT
GAACTTAAAA ATTTCACGCT TGACGTCATC GACGGTCTTT TCAAGAGTGG TGTCGGCCCA
CTAATCTTCA TTGGGATACT TGCCCCAGCA GTTGCTGCGC CTATGTTTGG TGATCAGTGG
CAAAGGGCTG GTGAAGTCAT TGCCATGCTA ACTCCATGGT TCTTACTGAA CTACATTTCT
TCGCCAATTT CTATGGCGAT GCATGTCACC CAAAATCAAA GAAAAGCATT GGCACTACAG
ATAGCTGGAC TCGTAATTAG AATTGGCCTC ACATTCTTTG CAATCAAATT TATGCCAATT
AATGTTCTTG AGTTTTATGC ATTCGCTAGC GCATTGTTTT ATGCAATCTA TTTTTATGTC
ATTGTATCTT CGGTGAAGAT AAAAAGCAGA GACATAATAA TTGCAGCAAA AAATAACCTT
TTTCTTACTT TGATCTGGGT TGGCGCTGCC GGTCTCCTAG TATCTGCGAT TCAATTCATC
ACGAAGAGTA CACTGTTTTA A
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| Protein sequence | MNPIARLKAL INRLLPRASF ARSVGVLAGG TAVAQGMGVL SLPLITRLYT PEDFSVLAVF
SSIVAIVSVA ACLRLEIAIP IPETDEDAAN LLALALIFCT VASLAACIAI WLFSSEIVTL
LRQPKIEPYL WTIPLGIWLT SSYSAVQLWA TRNKRFVAIA RTRMVQTLGS VGLQIVLGLT
SGIGALGLLL GQLIYCGAGS LGLLRTGWQI EKNLIKKISF QSLKANLEKY KKFPKYSTIE
GLANCAATDV PILIISSFVA GPEAGFLFLA MKVMIIPLGL IGRAVANVYL SQAAEKHRQG
ELKNFTLDVI DGLFKSGVGP LIFIGILAPA VAAPMFGDQW QRAGEVIAML TPWFLLNYIS
SPISMAMHVT QNQRKALALQ IAGLVIRIGL TFFAIKFMPI NVLEFYAFAS ALFYAIYFYV
IVSSVKIKSR DIIIAAKNNL FLTLIWVGAA GLLVSAIQFI TKSTLF
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