| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2899 |
|---|
| Symbol | |
|---|
| ID | 4671657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3074155 |
|---|
| End bp | 3074718 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639839956 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_987116 |
|---|
| Protein GI | 121595220 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTACG AAACCCGCTA TTGCACCCAC TGCGCCACGG CGCTGGCACC CATCGTGGTC
ATTGAGGACA GCGGCGAGAA GGAACGCCTG CGCTGCCCCG CCTGCGGCTG GACGCACTGG
AACAACCCGA CGCCCGTGCT GGCGGCCATC GTGGAGGTGG ACGGCCGCGT GCTGCTGGCG
CGCAATGCAC TGTGGCCACC CAAGATGTTC GCGCTGATCA CGGGTTTCAT GGAGGCCGGC
GAGACGCCCG AGGACGGCAT TGCCCGCGAA GTCAAGGAAG AAACCAACCT GGACGCGCGC
AGTGTGCAGC TGGTGGGCGT GTATGAGTTC ATGCGCATGA ACCAGGTCAT CATCGCCTAC
CATGTACGGG CCGAAGGCGA GGTGCGGCTG TCGCCGGAGC TGCTGGAGCA CCGCTTTTAT
GAGCCGGACC AGCTCAAGTG CTGGCCCGCG GGCACAGGCT ATGCGCTGGC CGACTGGCTG
CGCTCGCGCG GCCACGAGCC GGTGTTCTTC ACCGCCGAGG AAAATGCAGA GCGCCGCCGC
GGACTGGACG CGCCGAAGGA CTGA
|
|---|
| Protein sequence | MSYETRYCTH CATALAPIVV IEDSGEKERL RCPACGWTHW NNPTPVLAAI VEVDGRVLLA
RNALWPPKMF ALITGFMEAG ETPEDGIARE VKEETNLDAR SVQLVGVYEF MRMNQVIIAY
HVRAEGEVRL SPELLEHRFY EPDQLKCWPA GTGYALADWL RSRGHEPVFF TAEENAERRR
GLDAPKD
|
|---|
| |