| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2829 |
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| Symbol | |
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| ID | 4673414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2995653 |
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| End bp | 2996831 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639839886 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_987046 |
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| Protein GI | 121595150 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.560566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGAGG AGTCGACTGT GCAGCAGGGA ATCAAACGAC GCGGTTTTTC CGCCAGCCTG
GGGCTGGCGG CGTTGGGAGT GGGCGGGTGG ATCACGGGAT GCAGCAAGGT GCCGGACACC
ATCAAGATCG GTGTGGCGCA GCCCTTGTCC GGCCCCTTGG CGGGTCTGGG GCAGGACCTG
CTCAATGGCG TGAAGCTGGC GGTGGACGAG ATCAACCGAT CCGGCCTGAA CGTGGACGGC
AAGCGCGTGA CGCTGGAGGT GGTTGCGCAG GACGACCGCG CGGACGCCGC TTCGGGCAAG
GCGGCTGCGC AGCAGCTGCT GGAATCGGGC GTGGTGGCCG TCATCGGGCA CCTGAACTCG
GGCGTGAGCC TGGAGACCGC GCCCATCTAT GCCGCCAAGG AGGTGCCGCA GCTCATCATC
TCCACCAACC CGCGCATCAC GCAGCTGGGG CTGGCCACCA CCTTCCGCAT CGTCGCCAAC
GACAACCTGC AGGCGCGCGC CATCGGCGCG TTCGCGGCCG CGCAGCTCAA CGCCGATGCC
TACGCGGTGG TCGACGACGG CTCGCCCTAC GGCAAGGGAC TGGCCGAGGG CGCGGCCGCG
CAGTTGCTGG CGGCCAAGAA GCACATCGCC GTGCGCCAGA GCTTCGACGA CAAGACCGTG
GCCTTTGCTG AACTGGCGGG CCGGCTCAAG GAGGCGCAGG TGCGCGTCAT CGTCTGCATG
CTCAACGACT TCCAGGCGCT GGCGCTGCTG CAGGAACTGC AGAAGCTGGG CCACAGCCGT
GTGGCGCTGC TGGGCGGCGA CCTGGTGAAG ACGGCCGACA TGGCCAAGGG CATGGGCGTG
ATCGACGGGA TCTACGCCAC CTCGCCGGTG CTGGACGTGG CCGAGTTCAC CACCGGCCGC
CAGTTCCTGG AGAAGTACAT CGCCGCCTTC CAGAAGCCCC CGGCCTATGG CGGCCACTAC
ACCTACGACG CCGTGTACGT GGTCAGCGAG GCGATCAAGA AGGCCGGCTC CGCCGCGCCC
GCCGACATCA CGCGCGCGCT GCGCGGCATC AACGGCTACG CCCCCGTCAC CGGCACCATG
GCCTGGGACG GTCAGGGCGA GCTGCGCTAC GGCGCCGTGG GCGTGTACGA GCTGCGCAAG
GGCCAGTGGG AGCTGCGCAT GCGCTCCGAC CGCTGGTAG
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| Protein sequence | MREESTVQQG IKRRGFSASL GLAALGVGGW ITGCSKVPDT IKIGVAQPLS GPLAGLGQDL
LNGVKLAVDE INRSGLNVDG KRVTLEVVAQ DDRADAASGK AAAQQLLESG VVAVIGHLNS
GVSLETAPIY AAKEVPQLII STNPRITQLG LATTFRIVAN DNLQARAIGA FAAAQLNADA
YAVVDDGSPY GKGLAEGAAA QLLAAKKHIA VRQSFDDKTV AFAELAGRLK EAQVRVIVCM
LNDFQALALL QELQKLGHSR VALLGGDLVK TADMAKGMGV IDGIYATSPV LDVAEFTTGR
QFLEKYIAAF QKPPAYGGHY TYDAVYVVSE AIKKAGSAAP ADITRALRGI NGYAPVTGTM
AWDGQGELRY GAVGVYELRK GQWELRMRSD RW
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