Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2526 |
Symbol | |
ID | 4673227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2689533 |
End bp | 2690708 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639839593 |
Product | putative transcriptional regulator |
Protein accession | YP_986762 |
Protein GI | 121594866 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000101247 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAAACCA CAGAGCTGAT CGACCTGCTC AGCCGGGGCG AGGACAGTCG GCAGCAGTTC AAGACGGACA TGAACAATGC CGACGCCTTG GCAGCGGAGA TTGTTGCCTT CAGCAACACC GCTGGTGGTC GCATCTTCAT TGGGGTGAAC GACGACGGTT CGGTGCGCGG ACTATCCGGC GCCGACGTTG CTCGTCTCAA CATGCTCATC GCCAACGTGG CCTCACAGGT CGTGCGTCCC GCCGTGAACC CGCTCACGGA AAACGTGCCC CACCCGGCAG GCACGGTGCT GGTGCTGTCC ATCGCTGAAG GCGTCAACAA GCCCTACATG GACAAGAACG GCGCGATTTG GGTGAAGAAC GGCTCGGACA AGCGCCGCGC GACCTCGCGC GAGGAATTGC AGCGTCTGTT CCAGCAGGCG GGCTTGGTGC ACGCCGACGA AACGCCCGTG GCGGGCTTGA GCGCGGGCGA TGTGGACATG CCCTATTTCG AAACCTTCTT CGAGCAGCAA TTCGGTGAGC CGCTCGCCCA GCATAACCAG CCGTTGCCGC AGTTGCTGAC CAACATGAAC CTGATGAACC AGGGGCAGCT CAACGTGGCG GGCGGTCTGC TATTCGCCAA ATCACCGCAC TACGCGCTAC CCGCCTTCAT CGTCAAGGCC GTCGCCTTTG TCGGCACCCA GATTGAGGAC GAACGCTACA TCGACAGCCG TGACATCGCC GGCAAGCTGG CTGACGTGTT CCAGCAGACG CTGGGCTTTA TTGTCGCCAA CACCCGCGCT GCGCAGGGCG AACAGGGCTT CAACTCCCCG GGGCAGCCTG AGATTCCCCG CATCGTCTGG GAAGAGCTGG TCGCCAACGC CCTCATTCAC CGCGACTACT TCGTCAGCGC GCCGATCCGC GTACTGGTGT TTACGGATCG GGTCGAAATC ATCAGCCCCG GCCACCTACC TAACAACCTA ACGATCGAGA ACATCAAGGC CGGCAACTCA AATATGCGCA ACCCCATCCT GGCGTCCTTT GCCGCCAAGC TCCTCCCTTA TCGCGGATTG GGTAGCGGCC TGCTGCGCTC ACTGCGGGCA TGGCCGCAGA TCGAACTCAT CGATGATCGG GCCGGCAATC TGTTCAAGGC TATTGTGGCG CGTCCCAGTG TGCTGGAGCC GGCCGGAAGA TCTTGA
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Protein sequence | METTELIDLL SRGEDSRQQF KTDMNNADAL AAEIVAFSNT AGGRIFIGVN DDGSVRGLSG ADVARLNMLI ANVASQVVRP AVNPLTENVP HPAGTVLVLS IAEGVNKPYM DKNGAIWVKN GSDKRRATSR EELQRLFQQA GLVHADETPV AGLSAGDVDM PYFETFFEQQ FGEPLAQHNQ PLPQLLTNMN LMNQGQLNVA GGLLFAKSPH YALPAFIVKA VAFVGTQIED ERYIDSRDIA GKLADVFQQT LGFIVANTRA AQGEQGFNSP GQPEIPRIVW EELVANALIH RDYFVSAPIR VLVFTDRVEI ISPGHLPNNL TIENIKAGNS NMRNPILASF AAKLLPYRGL GSGLLRSLRA WPQIELIDDR AGNLFKAIVA RPSVLEPAGR S
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