| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2518 |
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| Symbol | |
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| ID | 4673633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2678046 |
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| End bp | 2679239 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639839585 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_986754 |
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| Protein GI | 121594858 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.172834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00753009 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCAGCGTA GAACCACCAC CACGCTGATG CTGGGCGTGG CCCAGACACT GGCGTGGGCG
TCGTCGTACT ACCTGCCGGC CGTGGTGGCC GCGCCGATGG GGCGAGACGT CGGCATGTCT
TCGTCGGCGG TGTTTGGGGC GTTCTCGATG GCGCTGCTGG TTGCCGCAGC AACCGGCCCC
TGGGCGGGGT GCGCCATTGA CCGGGCTGGT GGGCGGCCGG TACTGATCGT CAGCAACCTG
GTGTTTGCCG CAGGGCTCGC GGCGCTCAGC CTGGCCTCAC AGCCCGCCCA TGTCTTTGCT
GCCTGGGCCC TGATGGGCCT GGCCATGGGC AGCGGCCTCT ACGAGGCCGC GTTCGCCACC
GTGGTCCGCC TGCATGGCCA GGACGCCCGG CGGGCGATCA CCGGCATCAC CTTGCTGGCA
GGCTTTGCAA GCACGATCGG CTGGCCATTG ACGGCCTCCC TGGAGTCGGC GTTCGGCTGG
CGGCAGGCCT GCCTGACATG GGCGGCGCTG CATCTGCTCA TCGGCCTGCC GCTGAACGCG
ATGCTGCCCA CGGCCGCGCC GGCCGCTTCG GCCGGTGCGC AGGCCGCTGC GGCAGGGAGT
CCTCATCCAC AGGCAGCGGC GAGCCCGGCA CCGGCCCGGC GGCGTGCGGC CGTGCTCATG
GCCTGCGTGT TTGCCATTGC GTGGTTCAAC AGCACCGCGA TGGCGGCGCA TCTGCCGCAG
GTCCTGCAGG CTTCGGGCGT GGCCTTGGCT GGCGCGATCG GCATTGCGGC GCTGGTGGGG
CCGGCCCAGG TCGCGGGGCG ATGGGTCGAA TTCACCGTGC TCAAGCGGTC GCATCCGCTG
TTGTCGGCGC GGCTGGCCAC GCTGGCGCAT CCGCTGGGCG TCGTACTGCT GATGCTGCTG
GGCAGCCACG CGGCGCCCGC GTTCGCCGTG CTGCACGGGC TCGGCAACGG CATCCTGACC
ATTGCCATCG GCACCCTGCC GCTGCTGATC TTCGGCGCAC AAGGCTATGG GCAGCGGCAG
GGGTTCCTGA TGGTGCCCGC GCGCATCGTG CAGGCCGGGG CGCCATTCCT GTTCGGGTTG
GCCGTGGAGC GCTGGGGCGG CGCGGCGCTC TGGCTCTCCG CCACACTGGC GGTCCTGGCA
TCTTTGGCAC TGGCCGCCCT GGCCGCAGGC ATGAAACGGT CCGGCGACGC TTGA
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| Protein sequence | MQRRTTTTLM LGVAQTLAWA SSYYLPAVVA APMGRDVGMS SSAVFGAFSM ALLVAAATGP
WAGCAIDRAG GRPVLIVSNL VFAAGLAALS LASQPAHVFA AWALMGLAMG SGLYEAAFAT
VVRLHGQDAR RAITGITLLA GFASTIGWPL TASLESAFGW RQACLTWAAL HLLIGLPLNA
MLPTAAPAAS AGAQAAAAGS PHPQAAASPA PARRRAAVLM ACVFAIAWFN STAMAAHLPQ
VLQASGVALA GAIGIAALVG PAQVAGRWVE FTVLKRSHPL LSARLATLAH PLGVVLLMLL
GSHAAPAFAV LHGLGNGILT IAIGTLPLLI FGAQGYGQRQ GFLMVPARIV QAGAPFLFGL
AVERWGGAAL WLSATLAVLA SLALAALAAG MKRSGDA
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