Gene Ajs_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2402 
Symbol 
ID4671434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2555728 
End bp2556729 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content64% 
IMG OID639839470 
Producthypothetical protein 
Protein accessionYP_986639 
Protein GI121594743 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.766058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTGCC CCGCGCTCAT GCATGATGGA GCCTCCGTTC GGAATCTTCA TCAGATGCCA 
AACCGCCCCA CCGCATACCT TTGCCTGGCG CTCAGCATGA TGCTGGTGGG TGCCTACGTG
GCGCTCTCCA AGCCGCTGGC CGCGGCGTTC CCCGTGCTTT TGCTGGCGTG GTTGCGTTTC
GGTATCGGCG CAATGGCCAT GCTCGGATGG TTGAAGAAGC CGCACCAGGA GCCACCTCTG
ACGCGGCAGA CCCAAGGCCT GCTTTTTCTG CAGTCGCTGC TGGGCAACTT TCTGTTCACC
GTTTGCATGA TCTACGGCGT GAGCCTCACC AGCGCCACCT CTGCCGGGGT GATCATGGCG
ACCATCCCCG CATGCGTGGC GGTCATGAGC TGGCTGTTCC TGCGTGAACA GGTGGCGACC
CGCACCTGGG TGGCGGTGGC CTGCGCAGTG GCGGGTATTG TGCTGTTTGC GCTATCCAAA
CCAGAGCACT CCGCACACGC CAGCAATGCC CTACAGCCCG AAAATGCCCA AAACTTGCAA
TGGCTGGGCT ATGCCCTGCT GTTGGCCGCA TCGCTGTGCG AGGCCGCCTA TTCCGTCATC
GGCAAGAAGC TCACCGGCGC GCTGGGGCCA CGGCGCATCA CGGCGCTGAT CAACCTGTGG
GGCTTCATGC TCTCGATGCC TTTCGGGCTG TATTTCGCCC TGTACTTCGA CTTCACGGCC
GTACGCTGGC CCACTTGGTT GCTGCTGGTG TTCTACGCCA TGGCAGCATG CATGTGGAGC
GTGTGGCTGT GGATGACCGG CCTGAAGACC GTCCCCGCCG CGCAGAGTGG CGTATTCACC
GTGCTGCTGC CGGTGAGCGC AGCGCTGGTG GGCGTGCTGG CGCTGGGCGA ACGCTTCACG
ACCATGCAGT TCATGGCCTT TGGCATCGCA CTGGCCAGTG TCGTACTGGC CACGATGCCC
GCACGGCTGC CGTGGCGCAC CGGCCGCGAT ATGCGCGCCT GA
 
Protein sequence
MGCPALMHDG ASVRNLHQMP NRPTAYLCLA LSMMLVGAYV ALSKPLAAAF PVLLLAWLRF 
GIGAMAMLGW LKKPHQEPPL TRQTQGLLFL QSLLGNFLFT VCMIYGVSLT SATSAGVIMA
TIPACVAVMS WLFLREQVAT RTWVAVACAV AGIVLFALSK PEHSAHASNA LQPENAQNLQ
WLGYALLLAA SLCEAAYSVI GKKLTGALGP RRITALINLW GFMLSMPFGL YFALYFDFTA
VRWPTWLLLV FYAMAACMWS VWLWMTGLKT VPAAQSGVFT VLLPVSAALV GVLALGERFT
TMQFMAFGIA LASVVLATMP ARLPWRTGRD MRA