Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2289 |
Symbol | |
ID | 4672098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2423757 |
End bp | 2424344 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639839355 |
Product | OmpW family protein |
Protein accession | YP_986527 |
Protein GI | 121594631 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.473084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0354952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA ATCTTCTGGC CCTGGCCGTT CTGTGTGCGA TGACCTCCGG CGCTGCCTTC GCGCAGCAGG TTGCGGAAGG TTCCTGGCTG GTGCGTGCAC GCGCGGTGCA TCTGGACAGC GCCAACAACG GTGCCGCCGG CGACGCGGGC GTGAGCATCA ACGACAAGTG GATTCCTGAA GTCGACGTCT CGTACTTCTT CACGCCCAAC CTCGCTGCCG AACTGGTCCT GACCTACCCG CAAAAGCACG ACGTGCGCCT GAACGGCGAC AAGATCGGCT CGCTCAAGCA CCTGCCGCCC TCGCTGCTGC TGCAGTACCA CTTCACGAAC TTCGGCGCGT TCAAGCCGTA CGTGGGCGCT GGTGTCAACT ACACGCGCTT TTCCAGCGTG AAGCTGCCCG CGGGCCTGGA CGTGAAGCGC AACAGCTGGG GCGGTGCCCT GCAAGTGGGC TTCGACTATG CGCTGGACAA GAACTGGTCC CTGAACGTGG ACGTGAAGAA GGTGTACATC GACACCGACG TGCGCGGCGT GGGCACTTTC AAGGTCGACC CGGTGCTGTT TGGCGTGGGC GTGGGCTACC GCTTCTAA
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Protein sequence | MKKNLLALAV LCAMTSGAAF AQQVAEGSWL VRARAVHLDS ANNGAAGDAG VSINDKWIPE VDVSYFFTPN LAAELVLTYP QKHDVRLNGD KIGSLKHLPP SLLLQYHFTN FGAFKPYVGA GVNYTRFSSV KLPAGLDVKR NSWGGALQVG FDYALDKNWS LNVDVKKVYI DTDVRGVGTF KVDPVLFGVG VGYRF
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