| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2284 |
|---|
| Symbol | |
|---|
| ID | 4671906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2416009 |
|---|
| End bp | 2417223 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639839350 |
|---|
| Product | sodium/glutamate symporter |
|---|
| Protein accession | YP_986522 |
|---|
| Protein GI | 121594626 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0786] Na+/glutamate symporter |
|---|
| TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0465087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.066844 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATAC AGTTCAGCAC CTACTACACC CTGATCTTCG CGGCCATCGT GCTACTGGTG
GGCAAGTTCC TCGTGCAGCG CATCCGCTGG CTGCGCGAAT TCAACATTCC GGAACCCGTG
GCGGGCGGCC TGGTGGCGGC GCTCATCTCC TGGGGGCTGA ACGCCGCGTT CGATGTGCGT
GCGTCGTTCG ACACCGGCCT GCAGACCGCC TTCATGCTGG TGTTCTTCTC CTCCATCGGG
CTGAGCGCCA ACTTCCTCAA GCTGCGCGAG GGCGGCATGG GGCTGATCGT CTTCCTGCTG
GTCGTGGTGG TGTTCATCGG CGTGCAGAAC AGCGTGGGTG TGGCGCTGGC CACCGCGCTG
GGGCTGGACC CGCTGATCGG CCTGATCGCG GGCTCCATCA CATTGGTGGG CGGGCACGGC
ACGGCCGGGG CCTGGGGCTC GGTGCTGGAA AACGACCACG GCATCCCTGG CGCCATCACC
TTGGGCATTG CCTGTGCCAC CTTCGGCCTG GTCATCGGCG GGCTGATCGG CGGGCCGCTG
GCCAAATGGC TGATCCAGCG CCACGGGCTG AAGCACCCGC AGGGCACGGG CGATGCCGGC
GCGCTGGAGG CGGGCACGCC CAACTTCGAG TTCCCGCACA AGACACGCCT GATCACGGCG
GACGCGGCCA TCGAAACCAT GGCCCTGTTT GCCGGCTGCC TGGCCTTTGC CGAGTTCATG
AGCCAGTTGA CGAAGGGCAC GGCGCTGCAA CTGCCCACCT TCGTGTGGGC GCTGGGCGGG
GGCGTGCTGA TCCGCAACGT GCTGGACTAC GTCTTCAACT TCGAGGTGTT CGACCGCGCC
ATCGACGTGT TCGGCAATAC CGGGCTGTCC GTCTACCTGG CGATCGCGCT GCTGTCGCTC
AAGCTGTGGG AGCTGGCCGG GCTGGCGGGT CCGCTGGTCA TCATCCTGGG CGTGCAGACG
CTGGTCATGG CGGCCTACGC GGGCTTCGTC ACCTTCCGCC TGATGGGAAG CAACTACGAT
GCGGCCGTGC TCTGTGCGGG GCATTGCGGC TTCGGCATGG GCGCCACGCC CACGGCGGTG
GCCAACATGC AGGCCATTAC CAACCAGTAC GGCGCGTCGC ACAAGGCTTT CCTGATCGTG
CCCATGGTGG GCGCGTTCTT CATCGACCTG GTCAATGCCG TGGCCATCCA GGTCTTCATC
AACGTGTTCG GCTAA
|
|---|
| Protein sequence | MDIQFSTYYT LIFAAIVLLV GKFLVQRIRW LREFNIPEPV AGGLVAALIS WGLNAAFDVR
ASFDTGLQTA FMLVFFSSIG LSANFLKLRE GGMGLIVFLL VVVVFIGVQN SVGVALATAL
GLDPLIGLIA GSITLVGGHG TAGAWGSVLE NDHGIPGAIT LGIACATFGL VIGGLIGGPL
AKWLIQRHGL KHPQGTGDAG ALEAGTPNFE FPHKTRLITA DAAIETMALF AGCLAFAEFM
SQLTKGTALQ LPTFVWALGG GVLIRNVLDY VFNFEVFDRA IDVFGNTGLS VYLAIALLSL
KLWELAGLAG PLVIILGVQT LVMAAYAGFV TFRLMGSNYD AAVLCAGHCG FGMGATPTAV
ANMQAITNQY GASHKAFLIV PMVGAFFIDL VNAVAIQVFI NVFG
|
|---|
| |