| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2273 |
|---|
| Symbol | |
|---|
| ID | 4671375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2404219 |
|---|
| End bp | 2405466 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639839340 |
|---|
| Product | cystathionine beta-lyase |
|---|
| Protein accession | YP_986512 |
|---|
| Protein GI | 121594616 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.302386 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.932026 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAGC CCTCCACACC CGACCTGTCC ACCCGCCTCA TTCACCACGA GTACACACCG
CCGCAGGGTT TCCATGCCCC GCAGCCAGCG GTGCACAAGG CGTCCACCGT CATCTTCCCC
AACGTCGCCG CTATGCGCGC GCGCGAATGG AAGGACAAGA GCAGCTACAC CTACGGGCTG
CACGGCACGC CTACCACCTA CCAGCTGGAA GAGCGCCTGG CCACGCTGGA AGGCGGGTTG
CAGTGTCTGC TGGTGCCCAG CGGATTGGCC GCCATTTCCA CCGTATCGCT GGCGCTGCTG
CGCCAGGGCG ACGAGGTGCT GATCCCGGAC AACGCCTATG GTCCCAACAA GGCACTGGCC
GAGGTAGAGC TGCGCCACTA CGGCATCCGC CACCGTATCT ATGACCCCTT GGACCCGGCG
GACCTCGCAT CCAAGATCAC CGACGCCACG CGGCTGGTGT GGCTGGAGGC GCCGGGCTCC
GTCACGTTGG AGTTCCCCGA CCTGGTGGAG CAGGTGCGCA TCTGCCGCGC ACGCGGCGTG
GCTACGGTGC TGGACAACAC CTGGGGCGCG GGCCTGGCTT TCGCACCCTT CGACCTGCTG
GGCCGTGGCG CGCGTGCCGA GGGCGCGCTG GGCGTGGACG TATCCGTGCA TGCGCTCACC
AAGTACCCCA GCGGCGGGGG CGATGTGCTG ATGGGCAGCA TCACCACCCG CGACGAAGGC
TTGCATCTGC GCATCAAACT CACGCATATG CGGCTCGGGC TCGGAGTGGG GGCGAACGAC
GTGGAAGCGG TCTTGCGGGC GCTGCCCAGC ATGGCGCTGC GCTACCACGC GCACGATGCG
GCCGCGCGCG ACCTGGCGCA GTGGATGGGC TTGCAGCCCG CGGTGGCCCA GGTGCTGCAC
CCGGCGCTGC CCGGATCGCC CGGCCATGCG CAGTGGAAGG CGCTGTGCGG CGCAGCCAAT
GGCGGGCAGG GCGCTGCCGC CGGCCTGTTC AGCGTGGTCA TTGACGCACG CCACAGCCAG
GCGCAGGTGG ATGCCTTTTG CGACGGCCTG CGCCTGTTCA AGCTGGGCTA CAGCTGGGGC
GGGCCGATGA GCCTGGTGGT GCCCTACGAC CTGCCCAGTA TGCGCACGGG CGCCGCCGCG
CATCTGCGGC CCGGCACCGT GGTGCGCTTC TCCGTGGGGC TGGAGGCCGT GGACGACCTG
CGTGCCGACC TGGCGCAGGC GATGCACCAG GCCTTTGGAG CTGCCTGA
|
|---|
| Protein sequence | MKQPSTPDLS TRLIHHEYTP PQGFHAPQPA VHKASTVIFP NVAAMRAREW KDKSSYTYGL
HGTPTTYQLE ERLATLEGGL QCLLVPSGLA AISTVSLALL RQGDEVLIPD NAYGPNKALA
EVELRHYGIR HRIYDPLDPA DLASKITDAT RLVWLEAPGS VTLEFPDLVE QVRICRARGV
ATVLDNTWGA GLAFAPFDLL GRGARAEGAL GVDVSVHALT KYPSGGGDVL MGSITTRDEG
LHLRIKLTHM RLGLGVGAND VEAVLRALPS MALRYHAHDA AARDLAQWMG LQPAVAQVLH
PALPGSPGHA QWKALCGAAN GGQGAAAGLF SVVIDARHSQ AQVDAFCDGL RLFKLGYSWG
GPMSLVVPYD LPSMRTGAAA HLRPGTVVRF SVGLEAVDDL RADLAQAMHQ AFGAA
|
|---|
| |