Gene Ajs_2247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2247 
Symbol 
ID4671041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2381564 
End bp2382691 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content73% 
IMG OID639839314 
ProductFAD dependent oxidoreductase 
Protein accessionYP_986486 
Protein GI121594590 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCT ATGACTTTGT GATCATCGGC GCGGGCATTG CCGGCGCCTC CGCCGGTTGG 
GAACTGGCCG CGCACCGCCG CGTGCTGCTG CTGGAGCGGG AGGCCCAGCC CGGCTACCAC
ACCACCGGCC GGTCGGCTGC GCTGTACTCG GCCACCTATG GCACGCCCAA CATCTGCGCA
CTCACACGGG CCAGCCGCGC GTTCTACGAT GCGCCGCCGC CCGAATTCGG CAGCGCCCCC
ATCCTCACGC CGCGCGGCGT GGTGTACCTG GCGGGGCCCG ACCAGCTCGA CCTGCTGGAG
GCCGCGTACG CCGAGGCGCT GCCGCGCAAC CCGCAGGTGC GCCGCCTGAC GCGCGAGGAG
CTGCTGGAGC AGGCCCCGTG CCTGCGCCCC GAGGCCGTGG CCGCGGGCAT GAGCGAGCCC
GGCGCCGCCG ACATCGACGT GCATGCGCTG CACCAGGGCT ACCTGCGCGG CCTGCGCCAG
CGTGGTGGCG AGATCCGCAC CCATGCCGAG GTGACGGCCC TGCAGCGGGG CGAGGAGGGC
TGGCACATCA CCCTGGCCGA TGGCGAGGTG CTGCGCGCGC GCGCCGTGGT CAATGCCGCA
GGCGCCTGGG CCGATGTGGT GGCAGCCCAG GCGGGCGTTC CGCCCATCGG GCTGGAGCCG
CGGCGGCGCA CGGCCTTCAC CTTCCCCGTG CCGGCCGGCA TGCAAGCGGC CCACTGGCCA
GCCGTCATCG GCATTGCGGA GGACTACTAC TTCAAGCCCG ACGCGGGGCA GATGCTGGGC
TCCCCCGCCA ATGCCGACGC CGTGGCGCCG CACGACGTGG TGCCTGAGGA ACTGGACGTG
GCCCTGGGCA TCCACCGCAT CGAGCAGGTG ACGTGCTTTC AGATCCGCCG CCCCTCGCAT
ACCTGGGCGG GGTTGCGCTC GTTCGTGGCC GATGGCGACC TGGTCATTGG CTGGGACAAC
CATGTGCCCG GCTTCTTCTG GCTGGCCGCG CAAGGCGGCT ATGGCATCCA GAGCGCGGCG
GGCGCGGCGC TGCTGACGCG GCAGTTGGCA CTGGGCGAGC CGCTGGCCCC GGAGCTGGCG
CGCGAGGGTG TGGACGTGGC GGGCCTGTCG CCTGCGCGGC TGCGCTGA
 
Protein sequence
MQPYDFVIIG AGIAGASAGW ELAAHRRVLL LEREAQPGYH TTGRSAALYS ATYGTPNICA 
LTRASRAFYD APPPEFGSAP ILTPRGVVYL AGPDQLDLLE AAYAEALPRN PQVRRLTREE
LLEQAPCLRP EAVAAGMSEP GAADIDVHAL HQGYLRGLRQ RGGEIRTHAE VTALQRGEEG
WHITLADGEV LRARAVVNAA GAWADVVAAQ AGVPPIGLEP RRRTAFTFPV PAGMQAAHWP
AVIGIAEDYY FKPDAGQMLG SPANADAVAP HDVVPEELDV ALGIHRIEQV TCFQIRRPSH
TWAGLRSFVA DGDLVIGWDN HVPGFFWLAA QGGYGIQSAA GAALLTRQLA LGEPLAPELA
REGVDVAGLS PARLR