Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2217 |
Symbol | |
ID | 4673826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2349504 |
End bp | 2351267 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639839286 |
Product | hypothetical protein |
Protein accession | YP_986458 |
Protein GI | 121594562 |
COG category | [S] Function unknown |
COG ID | [COG5293] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00749141 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.254652 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGAC GCTTTGGAAG CGATCTCGCT TCCTTCAAGG CGCTGAACTT AAAGCCCGGC TTGAACGTCC TGCTCGCCGA CAAGAGCGAA GGTGCGAACG ACCGACAGTC GAGAAACGGT GCAGGTAAGA CCAGCTTTAT CGAACTGGTG CATTTCCTGT TCGGAGCCGA TGTGCGCAAG GAGAACATTT TCCGCTCGGA GGCGCTGGCA CCTTGGACCT TCGACGTCAC CGTCGACATC GCCGGCGAGA CCGTATCGGC CGCCCGCAGT GGCACCAAGC CTAGCCGCAT CCTCGTCAAC GGGGCTGTGG AATCGTGGCC GATCGCGCCG CAATTTGATC AGCGCGCCGG ATTGTTCGAG CTATCCAACG AAAATTGGAA GGCCAATCTC GGGCATCTCT GGTTTGGCTT GCCCATCTCG GCCGGCGATG AGGTCGAGCG CTTCCAGCCG TCGTTCCGTT CGCTCTTCTC CTACTTTGTC AGGCGGCAAA ATGGCGGCGG TTTCCAGCAG CCGATGCAGC ATTCGACGAT GCAGCAAAGC TGGGACCAGC AGGTCTCGAT CTGCTATTTG CTCGGTCTCG ATTGGAGCAT TCCTGGCCGG TTCCAGGAAC TGAGGGCGCA GGAAAAGGTC GCGCAGGAAT TACGGAAGGC TGCCCGCAGC GGCGACCTCG GCCGCTTCTT CGGTAAGGCC GCCGATCTTC GGACACGGCT AACTATCGCC GAGGCCCACG CCAAACGACT CCGCAGCCAG CTCGAAACGT TTGAGGTTGT GCCTGAATAC AAGGCACTTG AGCAGGAAGC CAATGAGATC ACGCGCGAGA TCGACAGCCT GAACGTAGAG AACGTGATCG ATGGCAATCT CCTGCAACAG CTTCGAGCAT CGTTGGCCGA CGAAGACGCG CCGGATCTGG GTGATGTAAC GAAGCTCTAT GCCGAAGCCG GTGTCGTCCT GCCCGATATG GTACGGCGGC GTTTTGATGA GGTCGAACTC TTCCATCGGG CCATCATCGA AAACCGGCGC GCGCATTTGA ATGCCGAGAT CGCCTCGGCA GAGGCACGGG TTGTCGAGCG GGATCAGAGG ATCTCCGAGC GCGACCGTCG GCGCCGGCAG ATCATGGGAG TCCTGCGCTC CGGCGGGGCA CTTGAGCATT ATGTGTCCTT GCGTGAGGAA GCCGGAAGGG CCGAGGCCGA GGTCGAAGGA TTGCGCCAAC GGCTTGAAAC CGCCGAGCGG ATAGAAAGCA CAAAGGCCGA ACTCGATATC AAGCGAGCCA ATCTGACCAA GGCGCTCCGC GACGACATCC ATGAACGTAG CGACATCACC CGCGAAGCGA TCCTTGCGTT TGAGTCGCTA TCGGAATCCC TGTACGAAAA GGCCGGTAGC CTGACGATTT CCGAAACTGG AGGTGGTCCG CAATTCGAGG TCCATATCGA TGGACAGCGA AGCAAGGGCA TCACCAACAT GCAGATTTTC TGCTTCGATC TCATGTTGAC TGAGATCAGT TTGAAGAATG GGCGCGGCCC CGGCTTCCTG ATTCACGACA GTCATCTGTT CGACGGCGTC GATGAGCGTC AGATCGCAAA GGCATTGCAA CTTGGTGCTG AACGGGCGGA GGCGGCTGGT TTTCAATACA TCGTCACGAT GAACTCGGAC GTGCTGCCAC GTGAGGGGTT CAAGCCGGGC TTCGATATTC GCGCTCATGT CATGGACACG AAGCTGACTG ATGCGACCGA TACTGGAGGG TTGTTTGGTT TGCGCTTCGA ATAG
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Protein sequence | MIRRFGSDLA SFKALNLKPG LNVLLADKSE GANDRQSRNG AGKTSFIELV HFLFGADVRK ENIFRSEALA PWTFDVTVDI AGETVSAARS GTKPSRILVN GAVESWPIAP QFDQRAGLFE LSNENWKANL GHLWFGLPIS AGDEVERFQP SFRSLFSYFV RRQNGGGFQQ PMQHSTMQQS WDQQVSICYL LGLDWSIPGR FQELRAQEKV AQELRKAARS GDLGRFFGKA ADLRTRLTIA EAHAKRLRSQ LETFEVVPEY KALEQEANEI TREIDSLNVE NVIDGNLLQQ LRASLADEDA PDLGDVTKLY AEAGVVLPDM VRRRFDEVEL FHRAIIENRR AHLNAEIASA EARVVERDQR ISERDRRRRQ IMGVLRSGGA LEHYVSLREE AGRAEAEVEG LRQRLETAER IESTKAELDI KRANLTKALR DDIHERSDIT REAILAFESL SESLYEKAGS LTISETGGGP QFEVHIDGQR SKGITNMQIF CFDLMLTEIS LKNGRGPGFL IHDSHLFDGV DERQIAKALQ LGAERAEAAG FQYIVTMNSD VLPREGFKPG FDIRAHVMDT KLTDATDTGG LFGLRFE
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