Gene Ajs_2169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2169 
Symbol 
ID4673028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2296764 
End bp2297501 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content67% 
IMG OID639839238 
ProductLysR family transcriptional regulator 
Protein accessionYP_986410 
Protein GI121594514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAATCGA GTGACATCAC CGCCGAAATT CGTATGGCCG TCCTCGGCGA ATGGGTGCCT 
CCCCAGCTCG CCGACGTGCT CGCCCTGCAG CGTGCCGAAG AGCCGGAGAC CCATGCCGTC
CTGGCCGGCT GGACAGATCC CGGTCGAGGC GCGGAGCTGC CGGGCGACGG CTTCGACTTC
GCCTTGTCTG CGGTTGCCCG GCAGTGGCCT GGCTGGGTAT GCGAGCCGCT GTGGCATGAC
ACGCTGGCGG TCGCCGTGGC CAAGCGCTCC CACCTGCTGG CCTACCGTGA AGTGCCGTGC
GGGGAAGTGC TCAAGCAGCC CTTGATCTGC TCGCAGTCCA CGGCCGGCGA GCCGTGGCGC
ACGGTGGCGC AGCGTGTCCT CGGGGATGCG CTGCAGGATC GGGAGCAGCT GGTCAGCTCC
TTCGACATCG CGATGACGCT CGTGTCAGCC GGGTACGGCC TCGTCGTCGC GCCGTCTGCG
AGGCTTGCTG GCTACCTGAA CCGCGGCATC GCCGCACGGC CGCTGGCTGG CGCACCGACC
GTCGTGATGG CTTACCTCCT GCATCCCCTG GCGCGCCTGA CCGAACCCAT GGCGAGGTTC
ATCCAACGTG CTCGCTGCGT GTCCGGGGAC CTCGAAGTAC CTACTGAGCA ACGTCGTGCT
CTGCGGATAC CACTGTTACT GAACAGGCCA TCCGGCCACG TGAGCACGTG GCCCGACGAT
CATAGTCATC GCCTGTAG
 
Protein sequence
MESSDITAEI RMAVLGEWVP PQLADVLALQ RAEEPETHAV LAGWTDPGRG AELPGDGFDF 
ALSAVARQWP GWVCEPLWHD TLAVAVAKRS HLLAYREVPC GEVLKQPLIC SQSTAGEPWR
TVAQRVLGDA LQDREQLVSS FDIAMTLVSA GYGLVVAPSA RLAGYLNRGI AARPLAGAPT
VVMAYLLHPL ARLTEPMARF IQRARCVSGD LEVPTEQRRA LRIPLLLNRP SGHVSTWPDD
HSHRL