| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2060 |
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| Symbol | |
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| ID | 4671421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2169267 |
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| End bp | 2170322 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639839138 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_986312 |
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| Protein GI | 121594416 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.228828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.237445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCCT CCATCGCCCA CAGTCCCTGG CGTATGTCCG TTGCGCCGAT GATGGACTGG
ACCGACAGGC ACTGCCGCTA CCTGCACCGC CTGCTGTCGC GCCACACGCT GCTCTACACC
GAGATGGTGA CCACCGGTGC GCTGGCGCAC GGCGACGTGC AGCGCCATCT GCGCTTTGAC
GCGGCCGAGC ACCCCGTGGC GCTGCAGTTG GGCGGCAGCG AGCCGACCGA CCTCGCGCAC
TGCGCCCGTC TGGGCGAGCA GTGGGGCTAT GACGAGATCA ATCTCAACTG CGGCTGTCCC
AGCGAGCGTG TGCAGCGCGG CGCTTTCGGC GCCTGCCTGA TGAACGAGCC GCAACTGGTC
GCCGACTGCG TGAAAGCCAT GGTGGACGTG GTTCAGGTCC CGGTCACCGT CAAGCACCGC
ATCGGGATCG ACCAGAACGA AGACTACGGT TTCGTGCGCG ACTTCGTGGG CGTGGTGGCC
GACGCGGGCT GCCGCGTGTT CATCGTGCAT GCGCGCAATG CGTGGCTGAA GGGCCTGTCG
CCCAAGGAGA ACCGCGAGAT TCCCCCGCTG CGCTACGACG TCGCGGCCCG GCTGAAAGCC
GACTTCCCGC AACTGACCAT CGCCATCAAC GGGGGCTTTC AGACCGACGC CGCGGTGCTG
CAGGAATTGG CTCGGGTGGA TGGCGTGATG GTGGGCCGCG AGGCCTACCA CAACCCCTGG
TGGCTGGCGC GCTGGGACGA GCAGTTCTTT GGCGCCGCGC CCGCCGCGCT CACGCGCGAG
CAGGTCGAGG AAGACATGGT GGCCTACATG GAGCGCGAAG CCACCGCGCA CGGCACGCAC
TGGTATGCGG TGGCGCGCCA CATGCTGGGC CTGCGCAACG GACTGCCCGG CGCGCGACGC
TGGCGCCAGG TGTGGAGCGA CCACCGCTTG AAACACCTGC CCGCGCGCGA AGTGATGGCC
CTGGCGCGCA CCAAGCCGGG CGCCACCGCG CCCGATGCAC TGCGCGCAAG CGCCGTGCAA
GCCGGCGCCC TGCCAACGGA GCCGCTCAGC CTTTGA
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| Protein sequence | MPSSIAHSPW RMSVAPMMDW TDRHCRYLHR LLSRHTLLYT EMVTTGALAH GDVQRHLRFD
AAEHPVALQL GGSEPTDLAH CARLGEQWGY DEINLNCGCP SERVQRGAFG ACLMNEPQLV
ADCVKAMVDV VQVPVTVKHR IGIDQNEDYG FVRDFVGVVA DAGCRVFIVH ARNAWLKGLS
PKENREIPPL RYDVAARLKA DFPQLTIAIN GGFQTDAAVL QELARVDGVM VGREAYHNPW
WLARWDEQFF GAAPAALTRE QVEEDMVAYM EREATAHGTH WYAVARHMLG LRNGLPGARR
WRQVWSDHRL KHLPAREVMA LARTKPGATA PDALRASAVQ AGALPTEPLS L
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