Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1960 |
Symbol | |
ID | 4673530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2056169 |
End bp | 2056714 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639839041 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_986216 |
Protein GI | 121594320 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGTTG CCGACTACCG CTTGGCCTTC GAGATGGCAC CCGTGGGCCT GGTGATTTCG CGCAACCGCA CCATGGTGGA TTGCAACCGA CATGTGTGCG AGATATTCGG CGCCTCGCGC GAACTGCTCA TCGGCCAGTC GTTCCAGATC CTCTACCCCA GCCCGGACGA ATATGAGCGG CTGGGCGCAC GCATGGCGCC CATCCTGAAC GCACGCGGCC ACTATGCCGA CAACCGCATC ATGAAGCGCG CCAACGGCGA AACCTTCTGG TGCCACGTGT CCGGTCGCGC GCTGGATCGC AACGATCCGC ACGCCTCGGG CATCTGGAGC TTCGAGGACC TGAGCGCGCA GCGCCCCGTG CGCGCCGAGT TGACGGCGCG CGAACGCGAG GTGGCCGCGC GGCTGCTGGA CGGCATGACC TCCAAGGAGA TCGGCCGCGC GCTGGACATC AGCCACCGCA CGGTGGAGAT CTACCGCGCG CGGCTCATGC GCAAGTACGG CGCGTCCACG GCCGCGGACC TGGTGCAGAA GCTGTTGGCG GGATAA
|
Protein sequence | MNVADYRLAF EMAPVGLVIS RNRTMVDCNR HVCEIFGASR ELLIGQSFQI LYPSPDEYER LGARMAPILN ARGHYADNRI MKRANGETFW CHVSGRALDR NDPHASGIWS FEDLSAQRPV RAELTARERE VAARLLDGMT SKEIGRALDI SHRTVEIYRA RLMRKYGAST AADLVQKLLA G
|
| |