| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1943 |
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| Symbol | |
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| ID | 4673247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2035308 |
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| End bp | 2036432 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639839024 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_986199 |
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| Protein GI | 121594303 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.330013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.348823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCA CGCGCATCAC GACGGCCGCG CAGCCGCAGT TCAACAAGCC GCTGGGTCAT
CAGTTCGGCG AAGAGATCGC CTCCAGCGGG CTGAACCTGA AAGCCGCCAC CCGCGTGGCG
GACGCCACCG TGCGCTACGG ACTGAACATC CATCGCTTCG AGATGAACGC CGTCCATGCC
CGCCCGCCCG CCGCATCCAC CAGCAACGGG CGCGAAGAAA GCAGCGTGAA GGGACTGTTC
GCCGAAGGCA GCATCCCACT GGGCGACCAG TTCCTCCTGG GGGCGGGCGC GCGCTACGAC
TGGTACGGCT ACACCGACAA CCACGCGCAG CGTATCTCCA GCCGCGGCTT GAGCCCCAAC
ATGTCTCTGA CCTGGATGGC GACCGACGCG CTGAGCGTGC GCGCGTCCGC AGGCACCGCC
CTGCGCGGCG CGGGACTCAA GGAGGCGTTC TATGTGGACA ACACCCGCTG GCGGAACGAC
CCCGGACTGC AGCCAGAAAA GGCCCGCAAC GTCGAGCTGG GCGTGAACTA CAACGAGGGC
CCGTGGAGCG CTAAAGCCAC CGTGTTCCGC CAGCAGATCC GCAACTTCAT CTCCACCACC
ACCGGCGCAA CCTGGGCCGT GGCCAACGTA GGTACGATGA AGTCCTCAGG CTACGAGGTC
GGTGTGGCAT GGAATCGCAG CGTGTGGCGC AGCGGTCTTG CTGTGGCCAG CGCCAAGCCC
CAGCTCAATG GCTACGACCT GGGCGATGAA GCCTACGGGC TGGGCGTGTC CACGGGCCGC
AGCTGGAACC TGAACCTGGG CTACCGCATC CCCGCGTGGA ACCTGGACCT GGAATGGTTC
GGGCGCTTCG TGGAGTCCAA GACCTCCACC GAATACCTGA TCTCCGAAGG CCGCACCGCC
ACCAAGCGCA AGCCCGGCTT CGGCGTGCAC GACATCTACG TCAACTGGCA GCCCTACGGC
AACGACCGCG TGCGCGTGAC CTTCGGCGCG CGCAACCTGC TCAACAAGTT CTACTACGAC
CAGGGTAGCT ACGCCTACTA CGTGAGTACC GCTGGCGCCA TCAGTGGCCG GGGCTTCGCC
GAGCCGGGCC GCAACGTACG CCTGGACGTG ACGTGGAAGT TCTGA
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| Protein sequence | MKVTRITTAA QPQFNKPLGH QFGEEIASSG LNLKAATRVA DATVRYGLNI HRFEMNAVHA
RPPAASTSNG REESSVKGLF AEGSIPLGDQ FLLGAGARYD WYGYTDNHAQ RISSRGLSPN
MSLTWMATDA LSVRASAGTA LRGAGLKEAF YVDNTRWRND PGLQPEKARN VELGVNYNEG
PWSAKATVFR QQIRNFISTT TGATWAVANV GTMKSSGYEV GVAWNRSVWR SGLAVASAKP
QLNGYDLGDE AYGLGVSTGR SWNLNLGYRI PAWNLDLEWF GRFVESKTST EYLISEGRTA
TKRKPGFGVH DIYVNWQPYG NDRVRVTFGA RNLLNKFYYD QGSYAYYVST AGAISGRGFA
EPGRNVRLDV TWKF
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