Gene Ajs_1928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1928 
Symbol 
ID4672465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2018714 
End bp2019466 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content65% 
IMG OID639839009 
Producthypothetical protein 
Protein accessionYP_986184 
Protein GI121594288 
COG category[S] Function unknown 
COG ID[COG4340] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACATG TGACGTTCTC CCCTCCCTAT ACACCGCCCT CACAGGTCGT CGCGCAGTTG 
CGTGACCGGG GTTATGCGGT GCTGCAACCC CGGGACACAG CGACATGGGT GGGATGTGCC
TTGAACGATT TGCAGGCCCT GGCGGCCGAC TGGTCGGATC TGCCCCCGGA TGACTACCTC
AAGGACGGAG GCCGGTACCG CAGGCGGCGC CACTCCTGCT TCATTGTCGA GGGACCCGCC
GTGAACCAGG CACCGCACCG CGCGCACTGG CAGCCGGTGG AGTACAACGC GCTGCACGGA
GGGCTGCAGC GCTGGTTTGC GCCCATGCGT GGCGAAACGG TGGCTCGACC GGTGTGGCGG
CAACTCATGC AGGCGGCTGC GGGCCTCTCG CAAGCGATGT GCGGGCAACC GTCTCAACCC
TGCTACATCG AAGCACATCA GTTCCGCATT GACACCGAGG GCGGCATCGG CCGTCCGACA
CCCGAAGGCG CGCACCGCGA CGGCGTGGAC ATGGTGGCGG TGTTCCTGGT AAGCCGCCAG
GGCATCAAGG GTGGAGAGAC CCGCATTTTC GAAGCCAAGG GCCCGAATGG ACAGCGGTTT
ACCTTGAGCG AGCCCTGGTC CGTCATGCTG CTGGACGATG CGCGCATGAT CCATGAAACC
ACACCCATCC AGCCCACCGA AGATGGCGGC TGGCGCGATA CCCTGGTGGT TACCTGCCGG
GGCGGTGGCT TTCAAGGGGA TGCGTCCCAA TAA
 
Protein sequence
MAHVTFSPPY TPPSQVVAQL RDRGYAVLQP RDTATWVGCA LNDLQALAAD WSDLPPDDYL 
KDGGRYRRRR HSCFIVEGPA VNQAPHRAHW QPVEYNALHG GLQRWFAPMR GETVARPVWR
QLMQAAAGLS QAMCGQPSQP CYIEAHQFRI DTEGGIGRPT PEGAHRDGVD MVAVFLVSRQ
GIKGGETRIF EAKGPNGQRF TLSEPWSVML LDDARMIHET TPIQPTEDGG WRDTLVVTCR
GGGFQGDASQ