Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1928 |
Symbol | |
ID | 4672465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 2018714 |
End bp | 2019466 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639839009 |
Product | hypothetical protein |
Protein accession | YP_986184 |
Protein GI | 121594288 |
COG category | [S] Function unknown |
COG ID | [COG4340] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACATG TGACGTTCTC CCCTCCCTAT ACACCGCCCT CACAGGTCGT CGCGCAGTTG CGTGACCGGG GTTATGCGGT GCTGCAACCC CGGGACACAG CGACATGGGT GGGATGTGCC TTGAACGATT TGCAGGCCCT GGCGGCCGAC TGGTCGGATC TGCCCCCGGA TGACTACCTC AAGGACGGAG GCCGGTACCG CAGGCGGCGC CACTCCTGCT TCATTGTCGA GGGACCCGCC GTGAACCAGG CACCGCACCG CGCGCACTGG CAGCCGGTGG AGTACAACGC GCTGCACGGA GGGCTGCAGC GCTGGTTTGC GCCCATGCGT GGCGAAACGG TGGCTCGACC GGTGTGGCGG CAACTCATGC AGGCGGCTGC GGGCCTCTCG CAAGCGATGT GCGGGCAACC GTCTCAACCC TGCTACATCG AAGCACATCA GTTCCGCATT GACACCGAGG GCGGCATCGG CCGTCCGACA CCCGAAGGCG CGCACCGCGA CGGCGTGGAC ATGGTGGCGG TGTTCCTGGT AAGCCGCCAG GGCATCAAGG GTGGAGAGAC CCGCATTTTC GAAGCCAAGG GCCCGAATGG ACAGCGGTTT ACCTTGAGCG AGCCCTGGTC CGTCATGCTG CTGGACGATG CGCGCATGAT CCATGAAACC ACACCCATCC AGCCCACCGA AGATGGCGGC TGGCGCGATA CCCTGGTGGT TACCTGCCGG GGCGGTGGCT TTCAAGGGGA TGCGTCCCAA TAA
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Protein sequence | MAHVTFSPPY TPPSQVVAQL RDRGYAVLQP RDTATWVGCA LNDLQALAAD WSDLPPDDYL KDGGRYRRRR HSCFIVEGPA VNQAPHRAHW QPVEYNALHG GLQRWFAPMR GETVARPVWR QLMQAAAGLS QAMCGQPSQP CYIEAHQFRI DTEGGIGRPT PEGAHRDGVD MVAVFLVSRQ GIKGGETRIF EAKGPNGQRF TLSEPWSVML LDDARMIHET TPIQPTEDGG WRDTLVVTCR GGGFQGDASQ
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