| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1877 |
|---|
| Symbol | |
|---|
| ID | 4671152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1961442 |
|---|
| End bp | 1962671 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639838960 |
|---|
| Product | transposase Tn3 |
|---|
| Protein accession | YP_986135 |
|---|
| Protein GI | 121594239 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGCT ACCGATACAG ATTCGTAGGC TACGAAAAGC TGCCGTCTGG CATGAATGCG
GATGACGTGC AGCTGCACTG CCGTTTACCG GACGAGTTGA TCAGGGAAAT TAGGAACAGT
GGCTACGCGA AGCGCTACCA CCTGGGACTG GCCGTGCAGC TGTCGTTCCT CGCGCTGACT
GGCAGGAATG CCGATGCCGC GCTCAAGATG CCGAGTGCGA TGTTGAAAAT GCTGTGCGAG
CAACTGGGCA TCCACTCGAC CGCGATTGCC TCCCTAAAGT CGCTGTACTC GAATGCCGAC
CGGACCATCA GCAATCATAG GGCTTGGGTT CGAGAACAAC TCCTCTTCTC TACCTACGAC
TCTAACGCCG AGGCACGCTT GCAGGCAGCA TTGTCCCAGC AGGCGATCGA CGCCTCCTCC
GTCGATGACC TCCTCGCCTG CGCGCAGGAA TGGCTCTTCG GCAGCAGGAT CGTCCTGCCA
GGCCAGCGTG TGGTGCTCGA CCTGGCCCGA TCTGCGTTTC AGGTTGTCGA GAACCTGGCC
CTGGCAACAA TTCGAGCAGC GGTCACTCCA GTACGCCTTC GCGCGGTGCT CAAGGTCATG
CACGAAGAGA GTCCGACTCC TGGCATCTCG TTGCTGGAGT GGTTGAAGCA ATCGGCCGGC
AAACATGGGG TGAAGGGCCT CAAAGAGGTG AACTCACGCA TTGATGCTCT CAAAACACTG
GGCGTGCACC TGTGGGACCT GCAAGGGCTC TCGATTGGGC GCATTCATGC GTTCGCCCAG
GCCGTGGTCA ATCGGCCGCC CCCCGAAACC GCCCGCCGCA TCGAGGGTAC CCGCTCGATC
GAGATCGTGT GCTTTCTCAA ACACCTGCTC GGCGAGCTTA GTGACGAGGC GATTTTTCGG
AACAACCGGC ACACCAACGA CATCGTCCGC TCGGGCACCA AGCGCGTCCA GGCCAAACAG
GCACAGCGCG CAATCGAGTA CCGCCATTCC ATTGAATCGA TGCGGGACAT TGCTGCTGAC
AGCGCGCGCG ATGCCCATGA ACGGCTGGCA GCCATCACGG CGTTGGCCGA TGACATGCTG
GGCCGTCCGC CCGTCAGCCA TGCTGAGGTT GTCAGGGAAA CCTTGACCGA GCAGAGCACA
CGCGTTCGCA CGGTCCTTGA TGGCATGAAC TGCCTGGACC TGCGGGGAGA TCCCGAGCAC
GCCGACGGTA AGCCGCCAAG GCCGACATGA
|
|---|
| Protein sequence | MSSYRYRFVG YEKLPSGMNA DDVQLHCRLP DELIREIRNS GYAKRYHLGL AVQLSFLALT
GRNADAALKM PSAMLKMLCE QLGIHSTAIA SLKSLYSNAD RTISNHRAWV REQLLFSTYD
SNAEARLQAA LSQQAIDASS VDDLLACAQE WLFGSRIVLP GQRVVLDLAR SAFQVVENLA
LATIRAAVTP VRLRAVLKVM HEESPTPGIS LLEWLKQSAG KHGVKGLKEV NSRIDALKTL
GVHLWDLQGL SIGRIHAFAQ AVVNRPPPET ARRIEGTRSI EIVCFLKHLL GELSDEAIFR
NNRHTNDIVR SGTKRVQAKQ AQRAIEYRHS IESMRDIAAD SARDAHERLA AITALADDML
GRPPVSHAEV VRETLTEQST RVRTVLDGMN CLDLRGDPEH ADGKPPRPT
|
|---|
| |