| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1683 |
|---|
| Symbol | |
|---|
| ID | 4672599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1746923 |
|---|
| End bp | 1747618 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639838773 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_985950 |
|---|
| Protein GI | 121594054 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAAG TCGAGAACCT GCACGCCTAC TACGGCAAGA GCCATGTGCT GCACGGCGTG
GGATTTGACG TGCAGCCGGG CGAGATCGTC GCGCTGCTGG GCCGCAACGG CTCCGGCCGC
TCCACCGCGG CCAAGGCCGT GATGGGCCTG GTGGACTGGC AGGGCACGCT GCAGTGGAAG
GGCCAGGGCC TCAATGGCAG GAAGGCCTAC GAGATCGCCC ATCTGGGCAT CGGCTACGTG
CCCGAAAGCC GCGACGTGTT TCCCAACCTC ACCGTGCACC AGAACCTGCT GCTGGGCCAG
AAGGGCAGTG GCAGGGATAG CCGCTGGAGC TTTGACGACA TGTACGAGAT GTTCCCGCGC
CTGAAGGAGC GCCGCAACAT CGAGGCGGGC GTCATGTCCG GCGGCGAGCA GCAGATGCTG
ACCCTGTGCC GCACGCTCAT GGGCGACCCG GACCTCATCA TCATCGACGA GCCCACCGAG
GGGCTGGCGC CCAAAATCGT CGAACTGGTG GGCGAGTACC TCACGCGGCT CAAGCAGCGG
GGCATCTCCG TGCTGCTCAT CGAGCAAAAA CTCACCATCG CCATGACCAT CTCCGACCGC
GCGCTGGTCA TGGGGCACGG CAGCATCGTC TTTCAGGGCA CGCCCGACGA GCTGCGTGCC
AACAGCTATG TACGCAAGGA GTGGCTGGAG GTTTGA
|
|---|
| Protein sequence | MLKVENLHAY YGKSHVLHGV GFDVQPGEIV ALLGRNGSGR STAAKAVMGL VDWQGTLQWK
GQGLNGRKAY EIAHLGIGYV PESRDVFPNL TVHQNLLLGQ KGSGRDSRWS FDDMYEMFPR
LKERRNIEAG VMSGGEQQML TLCRTLMGDP DLIIIDEPTE GLAPKIVELV GEYLTRLKQR
GISVLLIEQK LTIAMTISDR ALVMGHGSIV FQGTPDELRA NSYVRKEWLE V
|
|---|
| |