Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1562 |
Symbol | |
ID | 4674625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1613465 |
End bp | 1613704 |
Gene Length | 240 bp |
Protein Length | 79 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639838649 |
Product | phage transcriptional regulator, AlpA |
Protein accession | YP_985831 |
Protein GI | 121593935 |
COG category | [K] Transcription |
COG ID | [COG3311] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.544133 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.10217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTTA CCTCGACCAC CTCTCCCTCT GCGCCCGCCG GACTTCATGC GCTGCGGCCC ACACTGCCCG AGACGGGATT CGTCCGCCAG AAGCTGCTGC TGAGCTTCGT CCCGTTCTCC AAGTCCACGC TTTGGCGGCG TGTCAAAGAA GGGTTGTTCC CCGCCCCGAT TCGCCTGTCG GTTGGGATCA CGGCATGGCG CGCAGAGGAT GTTCGGCGCT GGATTGCTGA GCAGGATTGA
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Protein sequence | MQVTSTTSPS APAGLHALRP TLPETGFVRQ KLLLSFVPFS KSTLWRRVKE GLFPAPIRLS VGITAWRAED VRRWIAEQD
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