| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1538 |
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| Symbol | |
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| ID | 4672829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1593808 |
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| End bp | 1595226 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639838625 |
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| Product | TraB pilus assembly family protein |
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| Protein accession | YP_985807 |
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| Protein GI | 121593911 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.245365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCC CTTCCATGCC TTCGGGGCCG TCCGGAACCG GACGGCCATC CAGCCATGCC
GTGCGCCGCT GGCTGGAGCG GCTGTCGCCC CGCCAGCGCC AGTACGCGCT GCTGGCCGCC
ATCCTGGGCG GCGGGATCGG CCTGCTGTGG ATGATCTTCA GCTTCGCGGG AAGCGATGCC
AAGCCGCACG GCGGCCGCGC GGCACAGACC CAGCCCGGCG ACGTCACCAA CATCGGCGTG
ATGCCACCAG GCGGCCAGGT CAATCCGGTG GACCAGTGGG TCGGCACGGC GGGACGCAAG
CTGGCCCAGT ACGAGACCGA GCGCGAGGCA CAGAGCCGGG TCAACAAGGA CCGCGAGGCC
TTCGAGAACA AAACCCTGCA GCGATTCGCG GAGCTGGAGA AGCGGCTGAC CAGCGCCCAG
CAAGCTGCAG CGTCGCCTCC TCCCGCGCCC ACGCCCCCGC CACCGGCGCC TGCACCGGCA
GCCCCGACCA CCATGCCGCC CGCAGCCGGC CTGCCGCCTG CGCCGTCCCC GGGCACGGGG
GCCATGCCCT CCGGTATGCC CACGTTCCAG GGCATGGCCG TGGCCACGCC GCCCACGCCC
GTGATCTCCC GTGTGACGCT CGCCGAGCGC CGCCGGCCAT CCGCCGAGGG CAGCGGCGAC
GGCAGCCACC AGGCCGAGGG AGCCAACCAG GCATCGAACG CCCCCAAGAC GGTGTCCACC
TTCCTGCCCG TGAGCTTCAC GCGCGGCATC CTGCTGGGCG GCCTCGATGC GCCCACGGGT
GGGCAATCCC AGGCCAACCC GCATCCAGTG CTGATCCGCC TGTCGGACAA CAGCGTGCTG
CCCAACCAGT TCCGCGGCGA ATACCGCGAG TGCTTCGTGG TGGCAGCGGG CTATGGCGAC
ATCAGCTCGG AGCGCGCCTA CCTGCGCACC GAGAACCTCT CATGCGTGCG CGCCGACGGC
GCCACGCTGG AAGTGCGCAT CCAGGGTTCG GTCTACGGCG AGGACGGCAA GGTCGGCATG
CGTGGGCGGT TGGTCACCAA GCAGGGCCAG ATGCTGGCCA ACGCGCTGCT GGCCGGTGTG
GTCAGCGGCA TCGGCCAGGG CCTGTCCACC GCCAACACCA CCTACAGCAG TTCCCCGCTC
GGGACCATGG CCAGCACCGA CAGCAATGCC GATGCCTACC GGGCGGGCCT GGGCCACGGT
GTCGGCAAAG CACTGGACCG GCTGGCCCAG TACTACATCA AGCTGGCCGA GAACACCTTC
CCGGTCATCG AGGTCGACGC CGGCCGTCAG ATCGACGTCG TGATCACCAA GGGCGTGCGC
ATCGATGTCC CGATGACGGC AGTCGCCGAG CGCGGCCAGC GCCGCACCGC TTCCCCCGAA
ACCCGCTACC TGGAGACCAC CGATGATGGC AACTACTGA
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| Protein sequence | MNTPSMPSGP SGTGRPSSHA VRRWLERLSP RQRQYALLAA ILGGGIGLLW MIFSFAGSDA
KPHGGRAAQT QPGDVTNIGV MPPGGQVNPV DQWVGTAGRK LAQYETEREA QSRVNKDREA
FENKTLQRFA ELEKRLTSAQ QAAASPPPAP TPPPPAPAPA APTTMPPAAG LPPAPSPGTG
AMPSGMPTFQ GMAVATPPTP VISRVTLAER RRPSAEGSGD GSHQAEGANQ ASNAPKTVST
FLPVSFTRGI LLGGLDAPTG GQSQANPHPV LIRLSDNSVL PNQFRGEYRE CFVVAAGYGD
ISSERAYLRT ENLSCVRADG ATLEVRIQGS VYGEDGKVGM RGRLVTKQGQ MLANALLAGV
VSGIGQGLST ANTTYSSSPL GTMASTDSNA DAYRAGLGHG VGKALDRLAQ YYIKLAENTF
PVIEVDAGRQ IDVVITKGVR IDVPMTAVAE RGQRRTASPE TRYLETTDDG NY
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