| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1533 |
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| Symbol | |
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| ID | 4673431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1588814 |
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| End bp | 1589398 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639838620 |
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| Product | hypothetical protein |
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| Protein accession | YP_985802 |
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| Protein GI | 121593906 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.758676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.66536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGC ATTCTGACTC CCTACATAGC CAGCCCCAGG CGTGGTGGCA GCGGCGCGCC
CATGCCCTGC TGGACTTCCT CGGCCATATG CGCCGGCGCT GGTACTTGTA CCTGCCCGTG
TTCGCGATCT GGGGCTTGGC CTATGTGCGG CTCTTCATCG ACCCGACCCC GCGCCTGCCA
CTGCTGGTCA ACTGGACGCC CAGCCTGCCC TACCACTTGG CGCTCATGCA GTACCAGCAC
CCGGCAGTGC AGCGCGGCGA CCTGATCGTC TTCGCGTTCG CGGGCGAGGC TCAGGCGCAC
TACCCCGGCC TGCGCGGGCA GCCCTTCTTC AAGCAGGTGC GCGGCATGCC CGGCGACATC
GTCACGGTCC TGAACCGCAC GGTCTTCGTC AACGGCGAGG CCGTGGGACT GGCAAAGACC
CATGCCTACG ACGGCCATCC GCTGGCGCCC ATCGCGCCGG TAGTGATCCC ACCCGGGCAT
TTCTACGTGC AGGGCATCGG TCCCCACAGC TTCGACTCAC GCTACGCCGA AAGTGGCCTG
GTGCGTGCCG AGCAGGTGGT GGGCATCGTG GTGCCGATCT TCTGA
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| Protein sequence | MTAHSDSLHS QPQAWWQRRA HALLDFLGHM RRRWYLYLPV FAIWGLAYVR LFIDPTPRLP
LLVNWTPSLP YHLALMQYQH PAVQRGDLIV FAFAGEAQAH YPGLRGQPFF KQVRGMPGDI
VTVLNRTVFV NGEAVGLAKT HAYDGHPLAP IAPVVIPPGH FYVQGIGPHS FDSRYAESGL
VRAEQVVGIV VPIF
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