Gene Ajs_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1530 
Symbol 
ID4673700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1586762 
End bp1587787 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content68% 
IMG OID639838617 
ProductTraU family protein 
Protein accessionYP_985799 
Protein GI121593903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.283148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.998199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA TCCCCCGCGC GCTGGCGACC ACGTTGCTGG CCGCGCTGCT CCTGGCCACT 
GGAACTGCTG CAGGCGCGGC GGGCGCGGCC ACCTGCACCG GCAAGTTCCC GAATCCGATC
ACTGACATCT GCTGGAGCTG CATCCTGCCG CTGAGCATCG GCAGCGCGCG CATCGGCAAC
TTCGGCGACC AGGAGGACAT CGACAACCCC TCGAGCCCGC TGTGCACCTG CGGCGTGAAT
CCCACCATCG GCCTGTCGAT CGGATTCTGG GAACCCGCGC GCCACGTCGA GGCCGTGCGC
AAGCCCTTCT GCCTGACCTC CCTGGGCGGC ATCGACCTCG ATCCCGGCAT CCCGGCGCCC
GAGGCGGCGC GCTTCACCCG CCCCGAGGGT GATGGCAACG GCGGCAGCTT CTACCAGGCC
CACTTCTACG TGAACCCGGT CCTCTATTAC CTGGAGGTCG TCACCGACTT CCCGTGCCTG
GAGAAGGGCT CGTTCGACCT GGCCTACCTC ACCGAGGTCG ATCCGCTGTG GGCCGACGAT
GAACTCACCC TGATCATCAA TCCTGACGCG GCGCTATTCG CCAATCCGGT AGCGATCGCC
GCGTGCGCCG CCGACTGCGT GGCGGCCTCG GTGGGCTTCG GCATCCGGGA GATGTTCTGG
TGCGCGGGCT GCCAGGGCGG CCTGTATCCG ATGAACGGCC ATGTCCCGTA CCACATGGGC
GGCGTGCGCA CCGCGGCCCT GATGGCCCAG CGGCTGACGG CCAAGATGCA CCGCGAGCTG
ATCGCCTGGG CCTGGCACGG CCAGGCCGGG CTGTGCGGGC CGTACTTCGC GCCAGTGATG
GACAAGACCG CCTACAAAAC CCAGCTCACC CACCCCATCC CCAACACCGC GAAGGAAGCC
GGCAAGTGCT GCCAGCCCTT CGGCCGCACG ACCGTGACCT GGGGCGCCGG GAAGGAGTAC
CCGGTGCGCG GCGAGGACTT CGCCTTCCTG CTCTTCAGAA AAAGGAACTG CTGTGTCGGC
TACTGA
 
Protein sequence
MTRIPRALAT TLLAALLLAT GTAAGAAGAA TCTGKFPNPI TDICWSCILP LSIGSARIGN 
FGDQEDIDNP SSPLCTCGVN PTIGLSIGFW EPARHVEAVR KPFCLTSLGG IDLDPGIPAP
EAARFTRPEG DGNGGSFYQA HFYVNPVLYY LEVVTDFPCL EKGSFDLAYL TEVDPLWADD
ELTLIINPDA ALFANPVAIA ACAADCVAAS VGFGIREMFW CAGCQGGLYP MNGHVPYHMG
GVRTAALMAQ RLTAKMHREL IAWAWHGQAG LCGPYFAPVM DKTAYKTQLT HPIPNTAKEA
GKCCQPFGRT TVTWGAGKEY PVRGEDFAFL LFRKRNCCVG Y