| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1499 |
|---|
| Symbol | |
|---|
| ID | 4674727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1554548 |
|---|
| End bp | 1556170 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639838595 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_985777 |
|---|
| Protein GI | 121593881 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0661] Predicted unusual protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAACC TCTCGAGTTC CACCACCACG GTCGGTCCTC GCCCCGGCGT GCGCCCATCT
GGTCTGCTAC GGGCGGTCCG GATCACGACG GTCTTTGCGG GCTTCCTGCT GTGGGTTGTA
TGGCACCGCG GGCTGATGCG CTGCGACACG CACTCCGTGG CCGATCGGTT TGCACAGACT
CTCCAGCGGC TCGGCACCAC CTTCGTCAAG CTGGGGCAGC ACCTCAGCCT ACGCAGTGAC
CTGCTGACGG ACGAAGCGCA GCGCGCTCTC GCCCGCCTGC AGACGCATGT GGCGCCCTTT
CCTGCCGAGC AGGCCGTCCA CGAGATCGAG GCCGCGCTTG GGGGCCGGAT CTCGGACCAC
TTCGCGCGCT TCGACATGAC GCCGCTCGCG GCGGCCTCGG TAGCGCAGAT CCATCTCGCC
GCGTTGTCGG ATGGTCGTGA GGTCGTCGTC AAGGTGCGCA GGCCGGGCGC CGCCGAGCAA
GCGGAAACCG ACATGCGCAT TCTGCGGAAC GTTGCGCGAA TGCTGGAGAT CCTTGTGCCC
TCGCTGCGCC GCTGGAGCCT CGTCGCGGTG GTCGACGAGA TCGCGGGCAA CTTCCGTCTC
GAGATGAACC TCGAGCGCGA GGCGCGTTCC GTGCGCCGTT TCTCCGACGC CTGGCGCGGG
TCCGCCGACA TTGAGATCCC CGATGTGATC GATGGGCTGT GCGCGCCGAC CGTCATGGTC
CAGGTATTCA GCACCGGAAC GCCCCCCGAG AACCTTCCCA CCGAAGCACG CGAATCCACG
GCCCGGCGGC TGGTGGACAG CTACGTAACG CAGATCTTCC GCGATGGGTT GTTCCACGGT
GACCCACACC CCGGCAATAT CTTCATGATG TCGGACGGCC GTGTGTGTCT GCACGACTTT
GGCATCGTTG GGCGGGTGGA CCGCCGCATG CGGCGGGCAC TGGCTGCCTT CGCGCTCGCC
TTCGTCGAGC AGGACACGGA CTGGGTGGTG GACGCCTGGC TCGACCTGGG GCTGGTCGTG
GAGCGCGCAG ACCGCGCGCT CTTCCTACCC ATCGTGCAAC AACTGCTGGC CGATTGTGCC
GAGCGGCCGC TGAGTGAATG GTCCTTGTCT GAGGCCATGA GCCAGTTGGT CGCCGCGGGC
CGCTCGAGCA ACGTGCGGCT ACCGCGGGAT CTGCTGGTGC TAACCCGCAC CATGCTGCTG
CTCGAGGGCA CCGTGCGCGG GCTGTCGCCG CAGTTTTCGA TCTTCGACTC GATCTCCCGG
CAAGCTGCCA GCGGTGTGCT CGACCAAAAG CCGGACGCGC CGACATCGAA GCGGTTGACC
TACGAACTAG GCAACGCCGC GAGCGACCTG CCGGCGCTGC TCGCGCGCCG GCTGCACGGC
GCGCTCGGCA GCGGTCGCTT GTTCGAACTG AGGATCGTGC CGGACGCGCG ACTGGAGTCC
GGTATCGAAC GCGCGAGCCG ACGCGTCGCC GTGGCACTCG TGACACTGGG CCTCTACATC
GCATCCAGCC TGCTGATGCA GCATGGCGTC GGTCCTCGCT GGGGCGACAT GCCGGTACTC
GCACTCGCCG GTTATGCGCT GGCGATCCGG TACACGTTTT CCCTCGCCCG AGGGCGGCAC
TGA
|
|---|
| Protein sequence | MPNLSSSTTT VGPRPGVRPS GLLRAVRITT VFAGFLLWVV WHRGLMRCDT HSVADRFAQT
LQRLGTTFVK LGQHLSLRSD LLTDEAQRAL ARLQTHVAPF PAEQAVHEIE AALGGRISDH
FARFDMTPLA AASVAQIHLA ALSDGREVVV KVRRPGAAEQ AETDMRILRN VARMLEILVP
SLRRWSLVAV VDEIAGNFRL EMNLEREARS VRRFSDAWRG SADIEIPDVI DGLCAPTVMV
QVFSTGTPPE NLPTEAREST ARRLVDSYVT QIFRDGLFHG DPHPGNIFMM SDGRVCLHDF
GIVGRVDRRM RRALAAFALA FVEQDTDWVV DAWLDLGLVV ERADRALFLP IVQQLLADCA
ERPLSEWSLS EAMSQLVAAG RSSNVRLPRD LLVLTRTMLL LEGTVRGLSP QFSIFDSISR
QAASGVLDQK PDAPTSKRLT YELGNAASDL PALLARRLHG ALGSGRLFEL RIVPDARLES
GIERASRRVA VALVTLGLYI ASSLLMQHGV GPRWGDMPVL ALAGYALAIR YTFSLARGRH
|
|---|
| |