Gene Ajs_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1365 
Symbol 
ID4674411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1432774 
End bp1433673 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content57% 
IMG OID639838476 
Productputative secreted protein 
Protein accessionYP_985658 
Protein GI121593762 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATGA AAGAACTGAT ACGCAAATAT GCAAGCCTGC TCATTGCGGG CTTTATCGCC 
GCAGGAGCTG CTGCCAGCGC GTCCGCCGAA TCGGCACCAG CGTCCAGTGC TGGAACGAAA
TCGTTTGTGC TGCAGCAGAT AAGGAACGCG ACGATCAAGA TCGACTACGG CGACGTCAGG
TTTCTGGTCG ATCCGATGCT GGCGAAAAAA GGCTCATATC CCGCGGCACC GGGAAGCTTC
AACAGCGAAA TCCGCAACCC TACCGTAGAC CTTCCCATAC CCCTTGAAAA AGTGATCGAC
GTGGATGCGG TAATCGTCAC GCATCTGCAC TTCGATCATT GGGACAACGA GGCCAAAGAA
CGCATCCCGA AAGACATGCC GATCTTTGCG CAGAACGATG AGGATGCCAG GACGATCCGA
GGCTCCGGCT TTCGGGACGT GCGCGTCTTG AATGAGGCAA CCGAATTCAA GGGAGTCCGC
CTGATCAAGA CAAGCGGCCA GCATGGCAGC GACGCTGCAA TGGCCGTCCG CGGGAAACTT
CTGGGCACGG TGTCTGGCGT GGTCTTCCAG CGCCCAGGCT TCAAGTCGCT CTACGTGGCT
GGCGATACCG TCTGGAATAC CCACGTCCAG GACGCTCTCG CCACATACCG CCCGGACGTC
ATCGTCCTGA ACGCGGGCTA TGTGCGATTC AACGATATCG ATGGCGCCAT CATCATGGGC
AAAGAGGATC TATATCGAGT GAATCAAGCC GCCCCTGGCG CTTATATCGT GGCGGTGCAC
TTGGAATCCC TGAACCATGC GACGCAAAGC CGGCAGGAAC TGAAGGATTA CATCAAGGAG
AAATCGCTCG ACCCTCAGCG AGTCCTCGTT CCCGATGATG GCGAAAGCTA CAGCTTCTGA
 
Protein sequence
MSMKELIRKY ASLLIAGFIA AGAAASASAE SAPASSAGTK SFVLQQIRNA TIKIDYGDVR 
FLVDPMLAKK GSYPAAPGSF NSEIRNPTVD LPIPLEKVID VDAVIVTHLH FDHWDNEAKE
RIPKDMPIFA QNDEDARTIR GSGFRDVRVL NEATEFKGVR LIKTSGQHGS DAAMAVRGKL
LGTVSGVVFQ RPGFKSLYVA GDTVWNTHVQ DALATYRPDV IVLNAGYVRF NDIDGAIIMG
KEDLYRVNQA APGAYIVAVH LESLNHATQS RQELKDYIKE KSLDPQRVLV PDDGESYSF