Gene Ajs_1361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1361 
Symbol 
ID4674435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1430252 
End bp1430770 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content61% 
IMG OID639838472 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_985654 
Protein GI121593758 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATG TAAGAGTGAA ACCTTGGCAG GACGGCGATA ACGCTCCCCC CGAGCTTCTG 
GAAAACATGC AAGCCCGTCG CCCGAACGGC GAGCTGATCG GTATCGATCG CGTCTTGCTC
AAGAGCTTTC CCCTGGCGAC CGGCTGGAAC GGTTTGCTCG GTCGCGTGCG GGCAGAGTTT
GAGCTGCCCC TCGAATACCG AGAACTCATC ATGTGCCGCG TTGCCGTGCT CAACCGGGCC
GAATTCGAGT GGAATGTCCA CAAGCCCGCC TACCTGCAGG CCGGGGGCAC GCCAGAAAAA
TGCGATGCGA TGCGCGCCGA CGGTATCGCT TCGCTTTTCG ACGGCAAGGA GCGAGCGCTG
CTGGAACTGA CGGACCAGTC CACCCGCAAC GTCGAAGTCG ATGCTGCCGT CATCGAGAAG
CTCAAGGCCT TCTTCGGAGA GCAGCAGACG GTAGAGGCGG TCGCGACGGT CGCCGCCTAC
AACATGGTGT CCCGCTTCTT GGTCGCCCTT GCGATCTGA
 
Protein sequence
MTHVRVKPWQ DGDNAPPELL ENMQARRPNG ELIGIDRVLL KSFPLATGWN GLLGRVRAEF 
ELPLEYRELI MCRVAVLNRA EFEWNVHKPA YLQAGGTPEK CDAMRADGIA SLFDGKERAL
LELTDQSTRN VEVDAAVIEK LKAFFGEQQT VEAVATVAAY NMVSRFLVAL AI