| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1340 |
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| Symbol | |
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| ID | 4674581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1408940 |
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| End bp | 1410403 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639838452 |
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| Product | phage integrase family protein |
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| Protein accession | YP_985634 |
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| Protein GI | 121593738 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.680009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.929089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCT CTGATCTGAT CGTCCGGCAG GCCAAGACCA CCGGCAAACG CTATACCCTC
CACGACAACG ACTGCCTGAG CCTGATGGTC TCTGCCGCAG GCGGCAAGTC ATGGATCTTC
CGCTATTCCT GGCTGGGCAC GCAAAAGCGC ATGTCCCTGG GCAGTTATCC CGCCCTCAGC
CTGCGGGAGG CCCGTGCCGA GCGGGACAAG GCCCAAGCCC TGATCGCCAG GGGGATCGAT
CCCCGGATCG AGCGTGATCA GCGCCGGCAC GCGGCCAGGC TGGCAGGCGA ATACACCTTC
AAGAACGTCT TCGATGCCTG GGTCGAGCAT CGCCGCAAGG AACTCAAGGA AGGCCGTCAA
AGCACGCTGT CGCAGATCCT GCGCATCTTC AACAAGGACG TGCTGCCTAC CTTGGGAAAG
ATGTCGATCT ACGACATTCG CCGGCCCCAG CTGGTGGGCG TGGTGGCGGC GATCGAGAAG
CGCAAGGCGT TCACCACCGC CGAGAAGGTG CGTACCTGGT TCAACCAGAT GTTTCGCTAT
GCCCTAGTCA TCGCCGAGGG GCTGGAAGTC AACCCGGCTG CGGACCTGGA CGTGGTGGCC
GAACCTAAGC CCCCAGTGGC GCACAACCCC TACCTGCACC TGCCCGAGCT GCCCGAGTTC
CTTCAGAAGC TCCGGCGCTA CAACCCCCGC GGCTGGCAGA CCCAGCTTGG CGTCCGGCTG
CTGTTCCTGA CGGGGGTGCG CACGGGCGAA CTGCGGCTGG CCGAGCCTGA GCAATTCGAC
CTCGACCGCG GTTTGTGGAT CATCCCGCCC CAGGTCGTCA AGCAGCTCCA GGACGAAATG
CGCAAGGCCG GCAAGCGGCC GCAGGACGTG CCGCCTTACA TCGTGCCCCT GTCCCTGCAG
GCCATCGAGA TCGTCCGCTA TCTCCTGGGC GTGATGCGGC CGGCGCAGAA GTACCTGCTG
TCGCACCGCA GCGAACTCAA GAAGCGCATC AGCGAGAACA CCCTCAACAA GGCCGTGCAG
CTCATGGGCT ACGAGGGGCG CCTGACCGGC CACGGCATCC GCGGCACCAT CTCGACCGCA
CTCAACGAGA TCGGATACCC GAAGATTTGG GTGGACGCGC AGCTTTCGCA CTCCGATCCA
AACAAGGTCA GCTCGGCCTA CAACCACGCC AAGTACGTGG AGCCGCGCCG CCGGATGATG
CAGGACTGGG CCGATCGCCT GGACCTGCTC GAACAGGGCG AAGTGGAAGC TGCGAGCGCG
CACCTGACCA TTCGTATCGA CGGGGTGCCG GTGATGGCAG AAGCGGAGGA TGTGGTGAGT
GCGGCCCCCA CGGTGGCCGA GCCTGTTGCC TCCGGTGTCT CGCCCGTGGT GGCCACGCCC
ATCGTCGTGA CCCCCGATGG CCAGTCCAAA TTCCCCCACC TGTGGCCACC CCAAATTCCC
CAGGCAAGAC CGGTTGGATT ATGA
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| Protein sequence | MALSDLIVRQ AKTTGKRYTL HDNDCLSLMV SAAGGKSWIF RYSWLGTQKR MSLGSYPALS
LREARAERDK AQALIARGID PRIERDQRRH AARLAGEYTF KNVFDAWVEH RRKELKEGRQ
STLSQILRIF NKDVLPTLGK MSIYDIRRPQ LVGVVAAIEK RKAFTTAEKV RTWFNQMFRY
ALVIAEGLEV NPAADLDVVA EPKPPVAHNP YLHLPELPEF LQKLRRYNPR GWQTQLGVRL
LFLTGVRTGE LRLAEPEQFD LDRGLWIIPP QVVKQLQDEM RKAGKRPQDV PPYIVPLSLQ
AIEIVRYLLG VMRPAQKYLL SHRSELKKRI SENTLNKAVQ LMGYEGRLTG HGIRGTISTA
LNEIGYPKIW VDAQLSHSDP NKVSSAYNHA KYVEPRRRMM QDWADRLDLL EQGEVEAASA
HLTIRIDGVP VMAEAEDVVS AAPTVAEPVA SGVSPVVATP IVVTPDGQSK FPHLWPPQIP
QARPVGL
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