Gene Ajs_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1334 
Symbol 
ID4674668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1401705 
End bp1402415 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID639838445 
Producthypothetical protein 
Protein accessionYP_985629 
Protein GI121593733 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.378299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.287859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCCA AAGCCCAACT GCTACAGCCC ACGCGGCTGC TCGATTTCAC GCACCCCGCC 
ATCGAAGCGC TGGTCGAGAA GCGGGGGTGG CGGCCGTTGC CGATGTATGA CCGTATCGGC
GCCGTCTACG ACTTCGTGCG CAACGAGATC GCCTTCGGCT ACAACGCTGG CGACGAGTTG
CCGGCATCGG CGGTGCTGGC CGATGGCATC GGCCAGTGCA ACACCAAGGG CACGCTGCTG
ATGGCCTTGC TGCGCGCCGT GGGCATTGCC TGCCGCTTCC ACGGTTTCAC CATCGACAAG
CCGCTGCAGA AGGGTGCGAT CACGGGGCTC GCCTATGTGC TGGCACCGCG ACGCATCATC
CACAGTTGGG TCGAAGTGGC CTTCGAGGGA CGGTGGGTGA ACCTGGAAGG CTTCATCCTC
GATGCACCCT ACCTGACCAG CCTGCAGCGG CGCTTCCCGG TCCGACAGCG GTTCTGCGGC
TACGGCGCGG CCACGCCCGA CCTGTCGGCG CCTGGCGTTG AATGGCGCGG CCAGGACACG
TACATCCAGA AGGACGGGAT CGCTGACGAC TTCGGCGTGT TCGACAGCCC GGACGAGTTC
TATGCGCGCC ACGGCTCGAA CCTCTCCGGC CTCAAGCGTT GGCTCTTCAC GCAGGTCATC
CGGCACCGCA TGAACGCCCA GGTCCGACGC ATCCGCGCCG AAAAGTGGTG A
 
Protein sequence
MEAKAQLLQP TRLLDFTHPA IEALVEKRGW RPLPMYDRIG AVYDFVRNEI AFGYNAGDEL 
PASAVLADGI GQCNTKGTLL MALLRAVGIA CRFHGFTIDK PLQKGAITGL AYVLAPRRII
HSWVEVAFEG RWVNLEGFIL DAPYLTSLQR RFPVRQRFCG YGAATPDLSA PGVEWRGQDT
YIQKDGIADD FGVFDSPDEF YARHGSNLSG LKRWLFTQVI RHRMNAQVRR IRAEKW