Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1334 |
Symbol | |
ID | 4674668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1401705 |
End bp | 1402415 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639838445 |
Product | hypothetical protein |
Protein accession | YP_985629 |
Protein GI | 121593733 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.378299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.287859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGGCCA AAGCCCAACT GCTACAGCCC ACGCGGCTGC TCGATTTCAC GCACCCCGCC ATCGAAGCGC TGGTCGAGAA GCGGGGGTGG CGGCCGTTGC CGATGTATGA CCGTATCGGC GCCGTCTACG ACTTCGTGCG CAACGAGATC GCCTTCGGCT ACAACGCTGG CGACGAGTTG CCGGCATCGG CGGTGCTGGC CGATGGCATC GGCCAGTGCA ACACCAAGGG CACGCTGCTG ATGGCCTTGC TGCGCGCCGT GGGCATTGCC TGCCGCTTCC ACGGTTTCAC CATCGACAAG CCGCTGCAGA AGGGTGCGAT CACGGGGCTC GCCTATGTGC TGGCACCGCG ACGCATCATC CACAGTTGGG TCGAAGTGGC CTTCGAGGGA CGGTGGGTGA ACCTGGAAGG CTTCATCCTC GATGCACCCT ACCTGACCAG CCTGCAGCGG CGCTTCCCGG TCCGACAGCG GTTCTGCGGC TACGGCGCGG CCACGCCCGA CCTGTCGGCG CCTGGCGTTG AATGGCGCGG CCAGGACACG TACATCCAGA AGGACGGGAT CGCTGACGAC TTCGGCGTGT TCGACAGCCC GGACGAGTTC TATGCGCGCC ACGGCTCGAA CCTCTCCGGC CTCAAGCGTT GGCTCTTCAC GCAGGTCATC CGGCACCGCA TGAACGCCCA GGTCCGACGC ATCCGCGCCG AAAAGTGGTG A
|
Protein sequence | MEAKAQLLQP TRLLDFTHPA IEALVEKRGW RPLPMYDRIG AVYDFVRNEI AFGYNAGDEL PASAVLADGI GQCNTKGTLL MALLRAVGIA CRFHGFTIDK PLQKGAITGL AYVLAPRRII HSWVEVAFEG RWVNLEGFIL DAPYLTSLQR RFPVRQRFCG YGAATPDLSA PGVEWRGQDT YIQKDGIADD FGVFDSPDEF YARHGSNLSG LKRWLFTQVI RHRMNAQVRR IRAEKW
|
| |