| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1323 |
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| Symbol | |
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| ID | 4674018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1389767 |
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| End bp | 1392736 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639838435 |
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| Product | transposase Tn3 family protein |
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| Protein accession | YP_985619 |
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| Protein GI | 121593723 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.32373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGCCC ACCTGCCGCT GCCCAACCCC ATGCCCGCCT TCGCCCTGCG CTTCGTCGGC
CAAGAGGCCT TGCCGCCTCG CCTGAGTGAG TTTGATCGGG AGCAGTTCTT TTCGCTCACG
TCGGCGGACG TGGCGGCCCT CCGGGAGCAG TTCCGCAGCG ACCGCCGCCT GCCCGCCGCG
CTGATGCTCA TGTTCATGCG CGTGGCCGGC CGACCGCTCG ACGGTTTCAA CGTGCTGCCC
CGAAACCTCC TCCGGCACAC CGCCCAGGTC CTGGCCGTGT CGCCGCCGTC CATCGCCAGC
CTGCGGTCGA TCTACAAGCG CCGGCAGACC CTCTTCAAGC ACCAGCTCTG GGCCAAGACC
TATCTCGGCC TGCGCGAACT TGCAATCGAC GACGAAGTCG CGCTGACCGC GGCCCTGCTG
GCCCAAGCAG CCGACGCCTC CCACGCCGAT GACCTGGTCC AGTCGGCCAG CCACTGGCTG
TTCACGCGGC GCATCCTGAT CCCAGGAGCG CGCCGCCTGC AGGACTGGGC CCGAGATGCA
TTCGCCGCGG TGGAGGCGCA GATCCTCAGC GCGGTGAATG CCGCCGTACC ACCGGCAGCG
GCGCAGAAGG TTGTCGACGC CGCATACAGC ACGCGGCCGG GCACCGACAC GACGTGCCTG
GAGTGGCTCA AGACGCCGTC CAAGCGTCAC GGCCCGAGCA CCCTTGCGGA GACCATCGAC
AAGGTCCGCT ACCTGAAAGA GCTCGGTGCC CACGACTGGA ACCTGAATGC CGTGTCGCTG
GCAAAGCAGC AGGCCTATGC CCGTCAGGTC CAGGCCAGGC GCCCCGTGAA GACGCGGGAG
ATCAAGCCAT CGCGCCAGCT GATCGAGTTG GTGTGCTTCC TGCGGGTGAC GCTGCTCGAA
CTCACCGATG TCGCCCTCTT GCAAACCAGC CGGCGCAGCC AGCAACTGTT CCGCGAGGCG
GCGGACAAGG CGCAATCAAA CCGTATCCGG GGCACGACAG GCCTGATCCA GCAGGCGGCC
AAGGCGCGAT CCGTCCTGTA CGACGAAACG AAGACCTGGC AGGCGAGAGT CCTGGAAGCC
AGAGAACTGC TCGCCGAGCT CGGCGAAGCC GCCAGCGGCA GCTTCGTGTC CTTGGTTCGC
AAGGCCTTGG CGGAAGACAG CCAGCGCGTG CGCGCTTGCC TGGGAGCGCT GAAAGATCTG
GACCTCGGTG GCCGCCCCGG CGATCCGGGC TTCGAACAGT GGAAGTCCTG GACGGATCTG
CAGCGCAAGG GTGTGACCGA GCTGAAGGAG GGCGTACCGC TGCCAGATGT TGGCACAGCC
TGGCACGGCC TGGTCCGCGA TCTGGACCCC CGCTCAGGGT TTCGGGCGTT TGAGGCCTGC
ACGATGATGT CGCTGCGCAA GAGCCTTCGC CGAGGCAGTG TCTGGCTGGA CCACTCGCTG
AGTTTTCGGG AGCGAGACCA GATGCTCATC CCGCCGGCGG ATTGGGTCTT GCAACGGGAC
GAGCAGGTTG AGTTGCTGGG CATGCCCAAG TCGGCGGCCG AATTCCTGGA GCCCCTGCTG
GCCAACTTGA TGGCCGCTAT GTCTGCGGTG GCAGAGGCCC AGCGGCGCGG CAAGGTCGAG
ATCGGCGCCG ACGGCATGCT CCACCTGCCT GCGATCACGG CACTGCCGGA TCAAGGCGAG
CCGGTGCGCA CACGCGAGAC CATCTACAAC TTGATTGGCA GCGTACAGTT TCCGGACATG
CTGTTGGAGG TGGATGCCGC CACCGGGTAC AGCGAAGCGC TGCTCGGCCA CCGCGCGCAG
TCCACCGGCG AACTCGTGGC CCTGTACGGC GCGTTGCTGG CGCACGGTAC CGATGCGGAC
GCCAAGGGCG TGGCGTCGAT GATCCCTGGT CTGGAGCCCA CACAAGTCAC TGTGGCCATG
CGCGCCTTGG AAGGAAGTGG CCGCCTGCGC CGCGCCAACG AGCGCGTGGC CGAGTTCCAG
AGCCGGATCC CCATCGCGGC ACTGTGGGGC AACGGGGACA AGGCATCAGC CGACATGATG
TCGCTGGACG TTTCGCGCCA CCTGTGGAAC GCCCGTGTGG ACCCACGCCG GCGCACCTAC
GCCGCAGGCC TCTACACCCA TGTGCGCGAC CGCTGGGGCA TCGTCTACGA CCAACCCATC
GTGCTCAACG AACGACAGGC CGGCGTCGCC ATCGAGGGCA TCGAGCAGCA CAACAGCGCG
GCGGATCGGA TTCGGATCTC GCTGCTGGCG GTCGACACGC ACGGCTACAC GAATCCGGCG
ATGGCCATCT CCAAGCTGCT GGGATTTGAC TTGTGCCCCC GCCTGCGGGA CCTGGCCGAA
CGAAAGCTCT ACCTGCCTCG TGGATTCACC GTGCCCGATG GCTTGGAAGT CGTCACCGTT
CGGCGCGTGT CTTTGGCCGC CATCGAGCGC GGTTGGGATG AATTGCTTCG CCTGGCGGCG
TCAATCCGCT CGGGACGTGT CTCCGCCACG CTGGCATTGC AGCGCTTCGG GTCGGCTGCC
CAGGGGGATC CACTGCACCG GGCGGCGGAG CACCTGGGCC GGCTGCTGCG AACGGTGTTC
CTGTGCGACT ACATCGCCAT CGAGGACTTC CGCCGCGAGA TCCATACCTT GCTGAACCGT
GGCGAGTCGG TGCATCAGCT GCAGCGCGCC GTGTACTCAG GCAAGGTGGC GCCCGAACGC
GGCCGGCGGC GGGACGAGAT GAAGGCGATC TCCGGCTCAC ACGCCCTGCT GACGAACATC
GTGCTGGCCT GGAACACTGC CCGTATGCAC GAGGTGGTCG AGAGGCTCAA GCGAGACGGG
ATCCCAGTCG AGGACTACTG GCTGCGCCGC ATCGGCCCGG CGCACTTCTC GCACATCAAT
TTCCGCGGCA CGATGAGATT CGGCATCGAG AAGTTCGCGG CGGCGCTGAT CCAACGCGTG
CCGGGCCAGG CAACTCGGTC TGCTTCGTGA
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| Protein sequence | MTAHLPLPNP MPAFALRFVG QEALPPRLSE FDREQFFSLT SADVAALREQ FRSDRRLPAA
LMLMFMRVAG RPLDGFNVLP RNLLRHTAQV LAVSPPSIAS LRSIYKRRQT LFKHQLWAKT
YLGLRELAID DEVALTAALL AQAADASHAD DLVQSASHWL FTRRILIPGA RRLQDWARDA
FAAVEAQILS AVNAAVPPAA AQKVVDAAYS TRPGTDTTCL EWLKTPSKRH GPSTLAETID
KVRYLKELGA HDWNLNAVSL AKQQAYARQV QARRPVKTRE IKPSRQLIEL VCFLRVTLLE
LTDVALLQTS RRSQQLFREA ADKAQSNRIR GTTGLIQQAA KARSVLYDET KTWQARVLEA
RELLAELGEA ASGSFVSLVR KALAEDSQRV RACLGALKDL DLGGRPGDPG FEQWKSWTDL
QRKGVTELKE GVPLPDVGTA WHGLVRDLDP RSGFRAFEAC TMMSLRKSLR RGSVWLDHSL
SFRERDQMLI PPADWVLQRD EQVELLGMPK SAAEFLEPLL ANLMAAMSAV AEAQRRGKVE
IGADGMLHLP AITALPDQGE PVRTRETIYN LIGSVQFPDM LLEVDAATGY SEALLGHRAQ
STGELVALYG ALLAHGTDAD AKGVASMIPG LEPTQVTVAM RALEGSGRLR RANERVAEFQ
SRIPIAALWG NGDKASADMM SLDVSRHLWN ARVDPRRRTY AAGLYTHVRD RWGIVYDQPI
VLNERQAGVA IEGIEQHNSA ADRIRISLLA VDTHGYTNPA MAISKLLGFD LCPRLRDLAE
RKLYLPRGFT VPDGLEVVTV RRVSLAAIER GWDELLRLAA SIRSGRVSAT LALQRFGSAA
QGDPLHRAAE HLGRLLRTVF LCDYIAIEDF RREIHTLLNR GESVHQLQRA VYSGKVAPER
GRRRDEMKAI SGSHALLTNI VLAWNTARMH EVVERLKRDG IPVEDYWLRR IGPAHFSHIN
FRGTMRFGIE KFAAALIQRV PGQATRSAS
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