Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1309 |
Symbol | |
ID | 4673314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 1376235 |
End bp | 1377854 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639838422 |
Product | C-5 cytosine-specific DNA methylase |
Protein accession | YP_985606 |
Protein GI | 121593710 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0270] Site-specific DNA methylase |
TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.130072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.409653 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGC AACCTCGCAC CCCACGCGGT GCGCCCCAGG CCGCGCCACT GCTGTACGGC AGCGTGTGCA GCGGCATCGA GGCCGTGAGC CTCGCCTGGC AGCCCATCGG CCTCGAAGCC GCGTGGTTCG CCGAGATCGA GCCGTTCCCG AGCGCCGTGC TCGCCCACCG TTACCCCCGC GTGCCCAACC TGGGCGACAT GACCGCGATC GCCCGCCAGG TGCGCGCCGG CACCGTGCCG GCGCCCGACA TCCTGGTCGG CGGCACGCCG TGCCAGTCGT TCAGCGTTGC AGGTAGCCGT CGCGGGCTGG ATGACCCGCG CGGAGCCCTT TCCCTTGCCT ATGTGGAGCT TGCCAATGCC ATCGACCAAA TCCGCCACCA AGACCGCCGC CCCGCGGCCA CACTCGTCTG GGAAAACGTC CCCGGCGTGC TCAATGACCG CTGCAATGCC TTCGGTCAAT TCCTCGCTGC ACTGGCCGGA GAAAGCCGTG CGCTCCAGCC GCCAGGGGGT CGGTGGGCGC ACGCTGGTTG TGTGTCTGGA CCCCGCCGCC GCATCGCCTG GCGCGTGCTC GACGCTCAAT ATTTCGGTGT CGCCCAACGC CGCAAGCGCG TGTTTCTTGT GGCAAGTGGT GGAAATGACC TCGATCCCGC AGAAGTACTT TTTGAGCGCG CAGGCCTGCT CGGGGATTCT TGTGCGGGCC GCGCGCCGTG GCAAGAAGCT GCCCACGATG CTGGACCGGG TGCTGAAGCA GCAGGCGCAT GCGCAGGACT TGCAGGATTC GCAGGACTGA AGCAGCCCTA CGGCAAGATC ACGACGACGT TCGGATTCAG CGGCGGCATT GGCCCTGTCG ATGTGGCGGC ATGCCTGATG GCCGCTGGCC CCAAGCACGA CATCCGCACC GAGACGTTCA TGGTGCAGTC GGTCGCCGGC AGCATCGCCC ACACCCTCGA CACCGCCAAC AACGGCAAGG GCAGCAGCGA GGACGGCACC GGCAAGGGCG TTCCGATCAT CGCCTTCACC GCACAGGGCT GCGGGGCGGA TGCGACGACG AACCATGCAC CGACGCTGCG TGCCGGCAGA CATCGCCTCA GCCACGCGAA CGCCGGCGTG GTGCCGGCCA TCGCGTTCGC GCAGAACTCG CGCGGCGAGC TGCGGCTGGA ATCCGGCCAC GGCCAGCTTG CCGGGACGCT CTCCACGGGT GGCGGCAAGC CGGGCCAAGG CCGGCCGATG GTGATCGGCG TGGCGCTGCG CGGTCGCACC GAAGGCCTGG CCGCTGAACT GGGCGATGGC GTCTCGACCG CGCTGCGCAC CAGCAGCGGC GGTGCCGACA AGCCCCATGT GCTGGCACCG GACTTCGAGG CACATTTCCG CTACGACTGG AATAACCCCG GTCCGGGCGA CTGGTCGCAG TGGCGGGTGC GTCGGCTGAT GCCGGTCGAA TGCGAGCGGC TTCAAGGCAT GCCCGACGAC TACACGCTGG TGCCGTACCG CGGCAGGCCC TCCGCCGACG CGCCGCGCTA CAAGGCGATC GGCAACTCCA TGGCCGTGCC GTGCGTCGCG TGGCTGGGCC AGCGGCTGGT GCAGTGCCTG CACAAGACGG GATCGAGCGC TTCGGATTGA
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Protein sequence | MNPQPRTPRG APQAAPLLYG SVCSGIEAVS LAWQPIGLEA AWFAEIEPFP SAVLAHRYPR VPNLGDMTAI ARQVRAGTVP APDILVGGTP CQSFSVAGSR RGLDDPRGAL SLAYVELANA IDQIRHQDRR PAATLVWENV PGVLNDRCNA FGQFLAALAG ESRALQPPGG RWAHAGCVSG PRRRIAWRVL DAQYFGVAQR RKRVFLVASG GNDLDPAEVL FERAGLLGDS CAGRAPWQEA AHDAGPGAEA AGACAGLAGF AGLKQPYGKI TTTFGFSGGI GPVDVAACLM AAGPKHDIRT ETFMVQSVAG SIAHTLDTAN NGKGSSEDGT GKGVPIIAFT AQGCGADATT NHAPTLRAGR HRLSHANAGV VPAIAFAQNS RGELRLESGH GQLAGTLSTG GGKPGQGRPM VIGVALRGRT EGLAAELGDG VSTALRTSSG GADKPHVLAP DFEAHFRYDW NNPGPGDWSQ WRVRRLMPVE CERLQGMPDD YTLVPYRGRP SADAPRYKAI GNSMAVPCVA WLGQRLVQCL HKTGSSASD
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