| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1205 |
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| Symbol | |
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| ID | 4671989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1276139 |
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| End bp | 1277029 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639838327 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_985513 |
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| Protein GI | 121593617 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.178977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.675803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCATC CCGAGTCCCC CGCCCCCCTG CGCGATCCGC GCACCGCGCC CGCCGAGGCG
CCGCCGGTCA CGCACTACGA GAACTTTCCC GTGGCTTCGC TGCTGTGCCC GCCACGGATG
CGCCCGCCGA TCGCCGCGAT CTACGCGTTT GCGCGCACGG CCGACGACAT TGCCGACGAG
GGCACGGCCT GCGCAGCCGA GCGCCTGGCG GACCTGCGCG CTTACCGCGC CGAGCTTCAA
TCCGTGGCGG CCGGGCACTC CCCCCAGACG CGCTGGGCCG CCGTGTTTGG GCCGCTGCAG
GCGGTGTTGC GCAGCCACCA GCTGCCCGTG CCGCTGCTGG ACGACCTGCT GGACGCCTTC
ATGCAGGACG TCACCCTGAC CGAGGCCGGC GCCACCTACG CCGACCGCGC CGCGCTGCTG
GACTACTGCC GCCGCTCGGC CAATCCCGTG GGGCGCCTGC TGCTGCACCT GTACGGCGTG
CACGGGCAGG ACGCACTGCG CGAGAGCGAC GCCATCTGCA GCGCGCTGCA GCTCATCAAC
TTCTGGCAGG ACCTGAGCGT GGATCTGCCC CGCGGGCGCC ATTACCTCAC CGATGCCGAC
TGCGCCGCCC ATGGCGTGGC GCGCGCGGAC CTCGCGGCGC AGCGCCGCTC TGTCGCCAGC
GACCGGCTGG TGCTGGACTG CGCCGCCTGG GCCCGCGCTC TCATGCTCCA GGGCAGCCCC
CTGGTACACC GGCTGCCCGG CCGTGTGGGG TGGGAGCTGC GCCTGGTCGT GCAGGGCGGT
CTGCGCATTC TGGACAAGGT GCAGGCGCTG GATGGCGCCA GCCTGCTCGC GCGGCCGCGG
CTGGGCACGC TCGACTGGCC CCGCATGCTG GCGCGCGCCG CGCGCATGTA A
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| Protein sequence | MKHPESPAPL RDPRTAPAEA PPVTHYENFP VASLLCPPRM RPPIAAIYAF ARTADDIADE
GTACAAERLA DLRAYRAELQ SVAAGHSPQT RWAAVFGPLQ AVLRSHQLPV PLLDDLLDAF
MQDVTLTEAG ATYADRAALL DYCRRSANPV GRLLLHLYGV HGQDALRESD AICSALQLIN
FWQDLSVDLP RGRHYLTDAD CAAHGVARAD LAAQRRSVAS DRLVLDCAAW ARALMLQGSP
LVHRLPGRVG WELRLVVQGG LRILDKVQAL DGASLLARPR LGTLDWPRML ARAARM
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