Gene Ajs_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1193 
Symbol 
ID4672548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1264528 
End bp1265481 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content71% 
IMG OID639838315 
Producthypothetical protein 
Protein accessionYP_985501 
Protein GI121593605 
COG category 
COG ID 
TIGRFAM ID[TIGR02284] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.248869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATT TCAAGGATGC CAATCGTGAC CCCCTGACCA ACGAACCGGG GGCCCACCCC 
ATCGGCACGG GCGTAGGCGC CGCGGGCGGA GCCGTTGCGG GCGCCGCCAC GGGCGCCATC
GGCGGCCCCA TCGGTGCTGC CGTGGGCGGT GTGGCGGGAG CCATTGTCGG CGGTCTGGCC
GGCAAGGCGG CGGCCGAGGC GGTCAACCCT ACGGCCGAGG ACGCCTACTG GCGTGAAACC
TACCAGCGCG AACCGTACTA CGTGACCGGC CGGGCCTACG AAGAATACCG CCCCGCCTAT
GAGATGGGCT GGAGCGCCGC CAGCCGCTAC CCCGGTGATT TTGAAACGGT GGAGCCCGAA
CTGTCGCGCG ACTGGGGCCG CGCCCGGGCC CAAAGCTCGC TGGAATGGGC GCAGGCCCAG
CCCGCCGCGC GCGCCGCGTG GGACCGCGTG CGCCGCAACC CCACGGTGAC CGCGTCGGGC
ACCGCGGCAG GCGCCACGCT GATGGACAAC GAGGACGTGG TGGACGTGCT GGACGATCTG
CTGGAATGCA GCCGCGACGG CGAGTACGGG TTTCGCACCT CGGCCGAGCG TGCGGAATCG
CCCGAACTCA AGAGCCTGCT GGAGCGCCGC GCCCAGGAAT GCGCAATCGC CGCCACGGAG
CTGGAGAGTG CGATCCGCAG CCACGGCGGC GAGCCCTCCA GCGGCGGCAC CATGGCCGGC
GCGCTGCACC GCGGCTGGGT GTCGGTGAAG GCGGCGTTGA GTACCTATGA CGACAAGGCT
GTGCTGGAAG AGTGCGAGCG CGGCGAGGAC GTGGCCGTGG CCCGCTACAA CAAGGCGCTG
GAAAACGCAC TGCCACCCGC CGTGCGCACC CTGGTCGAGC GCCAGGCTCA GGGCGTGAAG
CGCAACCACA ACGAAGTGCG CGCGCTGCGC AACCGTTACC AGGCCGCGTC CTGA
 
Protein sequence
MSDFKDANRD PLTNEPGAHP IGTGVGAAGG AVAGAATGAI GGPIGAAVGG VAGAIVGGLA 
GKAAAEAVNP TAEDAYWRET YQREPYYVTG RAYEEYRPAY EMGWSAASRY PGDFETVEPE
LSRDWGRARA QSSLEWAQAQ PAARAAWDRV RRNPTVTASG TAAGATLMDN EDVVDVLDDL
LECSRDGEYG FRTSAERAES PELKSLLERR AQECAIAATE LESAIRSHGG EPSSGGTMAG
ALHRGWVSVK AALSTYDDKA VLEECERGED VAVARYNKAL ENALPPAVRT LVERQAQGVK
RNHNEVRALR NRYQAAS