Gene Ajs_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1172 
Symbol 
ID4672382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1237585 
End bp1238262 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content64% 
IMG OID639838289 
Producthypothetical protein 
Protein accessionYP_985480 
Protein GI121593584 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACA ACTTCGACCT TCAAGAACAA GAACAGCTTG AGCAGATCAA GCACTTCTGG 
AACACGTGGG GCACGCCCAT CACCTGGGCG TTGATTGTCA TCATGGGGGG GCTTGCCGCC
TGGAACGGCT ACCGGCTGTG GCAGGGCCGC CAGGCCCAGC AGGCGACGGC ACTGGCCGAG
GCCGTGGAAA TGGCCGTGCA GGCGGGTGAC CTTGCGCGCG TGGAGCAAGC CGTGGGCGAC
TTGAAGTCGA GTTACGGCGG CACCGCGCAG GCGTGGCAGG CAGGCCTTCT GGCTGCCAAA
GCGCTGGCCG ACGCTGGCAA GTGGGATGCC GCCAAAAGTA CGTTGGCTTG GGTGGCCGAG
AAAGCGTCTG ATGAGGGTTA CCAGGCCTTG GCCCGGCTGC GCCTGGCCAG CGTCCTGATC
GAGCAAAAGG CCTACGACGA GGCCTCGGCG CAGCTGTCGG GGAAATTCCC CGCAGAGTTT
GCTGCTACGG TCGCGGATCG CAAGGGTGAT GTGTTCGCGT TGCAGGGCAA GAAGCAGGAA
GCCATCGCCG AGTACCGCCG TGCCTACCAG GCTTTTGACG AGCGTGTGGA ATACCGCCGC
CTGGTGGAAG CCAAGCTCAA CGCTTTGGGC GCACAGGTGG AGACGGTAGC CTCCGCTACG
TCGGGGGGCG TGCAATGA
 
Protein sequence
MANNFDLQEQ EQLEQIKHFW NTWGTPITWA LIVIMGGLAA WNGYRLWQGR QAQQATALAE 
AVEMAVQAGD LARVEQAVGD LKSSYGGTAQ AWQAGLLAAK ALADAGKWDA AKSTLAWVAE
KASDEGYQAL ARLRLASVLI EQKAYDEASA QLSGKFPAEF AATVADRKGD VFALQGKKQE
AIAEYRRAYQ AFDERVEYRR LVEAKLNALG AQVETVASAT SGGVQ