Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1172 |
Symbol | |
ID | 4672382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1237585 |
End bp | 1238262 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639838289 |
Product | hypothetical protein |
Protein accession | YP_985480 |
Protein GI | 121593584 |
COG category | [S] Function unknown |
COG ID | [COG2976] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAACA ACTTCGACCT TCAAGAACAA GAACAGCTTG AGCAGATCAA GCACTTCTGG AACACGTGGG GCACGCCCAT CACCTGGGCG TTGATTGTCA TCATGGGGGG GCTTGCCGCC TGGAACGGCT ACCGGCTGTG GCAGGGCCGC CAGGCCCAGC AGGCGACGGC ACTGGCCGAG GCCGTGGAAA TGGCCGTGCA GGCGGGTGAC CTTGCGCGCG TGGAGCAAGC CGTGGGCGAC TTGAAGTCGA GTTACGGCGG CACCGCGCAG GCGTGGCAGG CAGGCCTTCT GGCTGCCAAA GCGCTGGCCG ACGCTGGCAA GTGGGATGCC GCCAAAAGTA CGTTGGCTTG GGTGGCCGAG AAAGCGTCTG ATGAGGGTTA CCAGGCCTTG GCCCGGCTGC GCCTGGCCAG CGTCCTGATC GAGCAAAAGG CCTACGACGA GGCCTCGGCG CAGCTGTCGG GGAAATTCCC CGCAGAGTTT GCTGCTACGG TCGCGGATCG CAAGGGTGAT GTGTTCGCGT TGCAGGGCAA GAAGCAGGAA GCCATCGCCG AGTACCGCCG TGCCTACCAG GCTTTTGACG AGCGTGTGGA ATACCGCCGC CTGGTGGAAG CCAAGCTCAA CGCTTTGGGC GCACAGGTGG AGACGGTAGC CTCCGCTACG TCGGGGGGCG TGCAATGA
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Protein sequence | MANNFDLQEQ EQLEQIKHFW NTWGTPITWA LIVIMGGLAA WNGYRLWQGR QAQQATALAE AVEMAVQAGD LARVEQAVGD LKSSYGGTAQ AWQAGLLAAK ALADAGKWDA AKSTLAWVAE KASDEGYQAL ARLRLASVLI EQKAYDEASA QLSGKFPAEF AATVADRKGD VFALQGKKQE AIAEYRRAYQ AFDERVEYRR LVEAKLNALG AQVETVASAT SGGVQ
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