Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1162 |
Symbol | |
ID | 4672153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1227250 |
End bp | 1228161 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639838279 |
Product | peptidase M23B |
Protein accession | YP_985470 |
Protein GI | 121593574 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.465665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGTAT CGCGTAGTCT TGTGGTTTGG GGAGTTGCCG TGCTGGCTGG CGGTTTGCTG GCGGGGTGCA GCACCCCGAT CAACAGGGCT CCCGTGGAAG ATCGCGGCAC CTTTGCCGCG AGCAGCGGAA CGACGGGGTC CGCCGGGGCC GTGCCTGAGG TCAAGCCCTT GCCTGGTGCT GAAAACGCGG GCAAGCCTGG CTACTACACC GTGAAGCCAG GCGACACGCT GATTCGCATT GGCCTGGAAA ACGGGCAAAG TTGGAAAGAT ATCGCGCGCT GGAACAACCT GGAAAACGCC AACCTGATCG AGGTGGGCCA GGTGCTGCGT GTGGTGCCCC CTGTTGCGGC TTCGGCGACT GCGGTGGCAT CTGACACCGG TGTGGTCACC CGCCCCGTCA CGTCTTCGCC CTTGGCTGCA GCATCGGCTG CGAGTGCACC CAAGCCGTCG GCATCGGCGG CGTCTACACC GGCCGCGGTG GCGCCGGCAG CGGCACCCAG CGCGCCGGCG GTGGCCACCG CGCCGGCCGC TACCGCTGCA ACGGATGACG TCAACTTCAT CTGGCCCTCG TCGGGCAGCC TGTTGGCGGG ATTCGACGAG GTGCGTAACA AGGGCTACGA CATCGGCGGC AAGGCCGGCG ATCCGGTGCT TGCCGCTGCC GATGGGCGTG TGGTGTACGC CGGTGCTGGG CTTCGCGGCT ATGGCAACCT GGTGATCTTG AAACACAACA ACACCTATCT CACGGCCTAT GCGCACAACC AGACGCTGCT GGTGAAGGAA GACCAGAACG TGCGCCGCGG CCAGAAGATT GCCGAGATGG GAAGCACCGA CGCGGATCGT GTGAAACTGC ATTTCGAAAT CAGGCGCCAG GGCAAGCCCG TGGACCCCGC CCGCTACCTC CCCTCCCGTT GA
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Protein sequence | MLVSRSLVVW GVAVLAGGLL AGCSTPINRA PVEDRGTFAA SSGTTGSAGA VPEVKPLPGA ENAGKPGYYT VKPGDTLIRI GLENGQSWKD IARWNNLENA NLIEVGQVLR VVPPVAASAT AVASDTGVVT RPVTSSPLAA ASAASAPKPS ASAASTPAAV APAAAPSAPA VATAPAATAA TDDVNFIWPS SGSLLAGFDE VRNKGYDIGG KAGDPVLAAA DGRVVYAGAG LRGYGNLVIL KHNNTYLTAY AHNQTLLVKE DQNVRRGQKI AEMGSTDADR VKLHFEIRRQ GKPVDPARYL PSR
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