Gene Ajs_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1162 
Symbol 
ID4672153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1227250 
End bp1228161 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content65% 
IMG OID639838279 
Productpeptidase M23B 
Protein accessionYP_985470 
Protein GI121593574 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.465665 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGTAT CGCGTAGTCT TGTGGTTTGG GGAGTTGCCG TGCTGGCTGG CGGTTTGCTG 
GCGGGGTGCA GCACCCCGAT CAACAGGGCT CCCGTGGAAG ATCGCGGCAC CTTTGCCGCG
AGCAGCGGAA CGACGGGGTC CGCCGGGGCC GTGCCTGAGG TCAAGCCCTT GCCTGGTGCT
GAAAACGCGG GCAAGCCTGG CTACTACACC GTGAAGCCAG GCGACACGCT GATTCGCATT
GGCCTGGAAA ACGGGCAAAG TTGGAAAGAT ATCGCGCGCT GGAACAACCT GGAAAACGCC
AACCTGATCG AGGTGGGCCA GGTGCTGCGT GTGGTGCCCC CTGTTGCGGC TTCGGCGACT
GCGGTGGCAT CTGACACCGG TGTGGTCACC CGCCCCGTCA CGTCTTCGCC CTTGGCTGCA
GCATCGGCTG CGAGTGCACC CAAGCCGTCG GCATCGGCGG CGTCTACACC GGCCGCGGTG
GCGCCGGCAG CGGCACCCAG CGCGCCGGCG GTGGCCACCG CGCCGGCCGC TACCGCTGCA
ACGGATGACG TCAACTTCAT CTGGCCCTCG TCGGGCAGCC TGTTGGCGGG ATTCGACGAG
GTGCGTAACA AGGGCTACGA CATCGGCGGC AAGGCCGGCG ATCCGGTGCT TGCCGCTGCC
GATGGGCGTG TGGTGTACGC CGGTGCTGGG CTTCGCGGCT ATGGCAACCT GGTGATCTTG
AAACACAACA ACACCTATCT CACGGCCTAT GCGCACAACC AGACGCTGCT GGTGAAGGAA
GACCAGAACG TGCGCCGCGG CCAGAAGATT GCCGAGATGG GAAGCACCGA CGCGGATCGT
GTGAAACTGC ATTTCGAAAT CAGGCGCCAG GGCAAGCCCG TGGACCCCGC CCGCTACCTC
CCCTCCCGTT GA
 
Protein sequence
MLVSRSLVVW GVAVLAGGLL AGCSTPINRA PVEDRGTFAA SSGTTGSAGA VPEVKPLPGA 
ENAGKPGYYT VKPGDTLIRI GLENGQSWKD IARWNNLENA NLIEVGQVLR VVPPVAASAT
AVASDTGVVT RPVTSSPLAA ASAASAPKPS ASAASTPAAV APAAAPSAPA VATAPAATAA
TDDVNFIWPS SGSLLAGFDE VRNKGYDIGG KAGDPVLAAA DGRVVYAGAG LRGYGNLVIL
KHNNTYLTAY AHNQTLLVKE DQNVRRGQKI AEMGSTDADR VKLHFEIRRQ GKPVDPARYL
PSR