| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1073 |
|---|
| Symbol | |
|---|
| ID | 4671027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1128663 |
|---|
| End bp | 1129103 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639838192 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_985384 |
|---|
| Protein GI | 121593488 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.268412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCGC CCATGAACGA GTTCCAGCAA CGCATCGCAG CCAGCTTCGC GGCACAAGGT
TTGATGGCCA CCCTCGGCGC CCGCCTGGCG CTGGTGGTGG AGGGTGAGGT GCATATCGAG
ATGCCGTTTT CCACCCACCT GTCGCAGCAG CAGGGCTTCG TGCACGCCGG GGCCATCACC
AGCATCGTGG ACAGCGCCTG CGGCTACGCG GCGCTGACCC GCTCGCCCCC CGGCAGCGAG
ATCGTCACGG CGGAATTCAA GACCAATTTC ATGCGGCCCG CCATGGGTAC GCGCTTCCTG
GCCGTGGGCA AGGTGCAAAA CGCCGGGCGC ATGCTCACCG TGTGCACCGG CGAAGTGCGC
GCGTACACGG GCGACGGGCC CGACTACAAG GTGGTGGCGT TGATGCAGGC CACCATGGTC
AACGTGCCGG CCGGCGCCTG A
|
|---|
| Protein sequence | MPSPMNEFQQ RIAASFAAQG LMATLGARLA LVVEGEVHIE MPFSTHLSQQ QGFVHAGAIT
SIVDSACGYA ALTRSPPGSE IVTAEFKTNF MRPAMGTRFL AVGKVQNAGR MLTVCTGEVR
AYTGDGPDYK VVALMQATMV NVPAGA
|
|---|
| |