Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1067 |
Symbol | |
ID | 4670964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1120761 |
End bp | 1122758 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639838186 |
Product | acetyl-coenzyme A synthetase |
Protein accession | YP_985378 |
Protein GI | 121593482 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0785077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGCAT CGTCCAATGC CATCGAATCC GTATTGGTGG AGAACCGCGT CTTCCCGCCT GCCGATAGCG TGGTGAAGGC GGCCCGCGTG TCGGGCATGG CCGGCTACGA GGCCCTGTGC GCCGAAGCCA ACAAGGATCC CGAGGGCTTC TGGGCGCGCT TGGCGCGCGA GCACCTGCAA TGGACCAAGC CGTTCACGCA GACGCTGGAC GAGTCCAAGG CGCCGTTCTA CCGGTGGTTT GCCGACGGCG AGCTCAACGC CAGTGCCAAC TGCCTGGACA AGCACATGGG CACGCCGGTC GAGAACAAGG CCGCCATCCT CTTCGAGGCC GACGACGGCA CCGTCACCCA GGTCACTTAC CGGCAACTGC TGGAGCGCGT GAGCCAGTTC GCCAATGCCT TGAAGGCGCA TGGCGTGCAG CAGGGCGACC GCGTGCTCAT CTACATGCCG ATGGGCGTGG AAGGCGTGGT GGCCATGCAG GCCTGTGCGC GCATCGGCGC CACGCACAGC GTGGTGTTCG GCGGTTTCTC TGCCAAGGCG CTGAACGAGC GCATCATCGA TGCGGGCGCC GTGGCGGTGA TCACGGCCAA CTACCAATTG CGCGGCGGCA AGGAACTGCC CCTGAAGGCC ATCGTGGACG AGGGTCTGTC CATGGGCGGC TGCGACAGCA TCAAGAATGT CTTCGTATAC CAGCGCACGG CCACGGCCTG CGACATGGTG GCGGGGCGTG ACAAGACCTT CTCCGAGATC CTGGCCGGGC AGAGCACCGA ATGCCCACCC ACGCCCGTGG GCGCGGAGCA TCCGCTGTTC ATCCTCTACA CCAGCGGCTC CACGGGCAAG CCCAAGGGCG TGCAGCACAG CACCGGCGGC TACCTGCTGT GGGCCAAGGT GACGATGGAG TGGACCTTCG ACATTCGCCC CGACGACGTG TTCTGGTGCA CGGCCGATAT CGGCTGGATC ACGGGCCACA CCTACGTGGC CTACGGTCCG CTGGCTGCGG GTGCCACACA GGTGGTGTTC GAGGGCGTAC CCACGTACCC CAACGCCGGG CGCTTCTGGC AGATGATCGA GCGCCACAAG GTCACGGTGT TCTACACGGC GCCCACTGCC ATCCGCTCGC TCATCAAGGC GGCCGACTCC GACGAGAGCG TGCACCCCAA GAACTGGGAT CTGTCGAGCC TGCGCATCCT GGGCAGCGTG GGCGAGCCCA TCAACCCCGA GGCCTGGATG TGGTACTACC GCCATGTGGG CGGCGAGCGC TGTCCCATCG TGGACACGTT CTGGCAGACC GAAAACGGCG GCCACGTCAT CACCCCGCTG CCGGGTGCCA CGCCGCTCGT GCCGGGTTCG TGCACCTTGC CGCTGCCGGG CATCCAGGCC GCCATCGTCG ATGAAACCGG CAAAGACCTG CCCAACGGCG CGGGCGGCAT GCTCGTGATC AAGCGGCCCT GGCCCTCGAT GATCCGCACC ATCTGGGGCG ACCCCGAGCG CTTCAAGAAA AGCTACTTCC CCGAAGAGTT GGGGGGCACC ACCTACCTGG CCGGCGACGG CGCCGTGCGC AGTGCCGACC GTGGCTACTT CCGCATCACG GGCCGCATCG ACGACGTGCT GAACGTGTCG GGCCACCGCA TGGGCACGAT GGAGATCGAG TCCGCCCTGG TCGCCAAGAC GGACCTCGTG GCCGAGGCCG CCGTGGTGGG CCGTCCCGAC GACCTGACGG GCGAGGCGAT TTGCGCCTTC GTGGTGCTCA AGCGCTCGCG CCCCACGGGC GAGGAGGCCA AGCAGATCGC CACCGAACTG CGCAACTGGG TCGCCAAGGA GATCGGCCCC ATCGCCAAGC CCAAGGACAT CCGCTTCGGT GACAACCTGC CCAAGACCCG CAGCGGCAAG ATCATGCGCC GCCTGCTGCG CTCGATCGCC AAGGGCGAAC CCATCACCCA GGACACCAGC ACCCTGGAAA ACCCCGCAAT CCTGGATCAG TTGGCGCAGT CCAACTGA
|
Protein sequence | MSASSNAIES VLVENRVFPP ADSVVKAARV SGMAGYEALC AEANKDPEGF WARLAREHLQ WTKPFTQTLD ESKAPFYRWF ADGELNASAN CLDKHMGTPV ENKAAILFEA DDGTVTQVTY RQLLERVSQF ANALKAHGVQ QGDRVLIYMP MGVEGVVAMQ ACARIGATHS VVFGGFSAKA LNERIIDAGA VAVITANYQL RGGKELPLKA IVDEGLSMGG CDSIKNVFVY QRTATACDMV AGRDKTFSEI LAGQSTECPP TPVGAEHPLF ILYTSGSTGK PKGVQHSTGG YLLWAKVTME WTFDIRPDDV FWCTADIGWI TGHTYVAYGP LAAGATQVVF EGVPTYPNAG RFWQMIERHK VTVFYTAPTA IRSLIKAADS DESVHPKNWD LSSLRILGSV GEPINPEAWM WYYRHVGGER CPIVDTFWQT ENGGHVITPL PGATPLVPGS CTLPLPGIQA AIVDETGKDL PNGAGGMLVI KRPWPSMIRT IWGDPERFKK SYFPEELGGT TYLAGDGAVR SADRGYFRIT GRIDDVLNVS GHRMGTMEIE SALVAKTDLV AEAAVVGRPD DLTGEAICAF VVLKRSRPTG EEAKQIATEL RNWVAKEIGP IAKPKDIRFG DNLPKTRSGK IMRRLLRSIA KGEPITQDTS TLENPAILDQ LAQSN
|
| |