Gene Ajs_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0897 
Symbol 
ID4671106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp945848 
End bp946363 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content67% 
IMG OID639838021 
Productputative lipoprotein 
Protein accessionYP_985215 
Protein GI121593319 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCAGT CGCAACTGGC GGCTGACCAC CGCCCTCTGC GCGGCCGGCT GGTGCTCGGG 
ATCGTTGCAG CGGCAACCCT GGTCGCCTGC GCGCAGCCGC CACGCCCTGC GGATGCCAGC
CCGGACCATT GGTCCGGCCG GCTGGCCGTT CAGGTGGAAG ACGATGCAGG CCAATCCTTC
AGTGCCGGTT TTGAATTGAA GGGCCACGCC TCTGCGGGAC AGCTCACTCT GATCAACCCG
CTGGGCAACA TCATCGCGCG TGTGGAATGG ACTCCGCATC GCGCCGTGCT CGTCCAGGGG
CAGGGACGCA GGGAGGCTGC CTCGCTGCAG ACCCTGGTAC ATGACCTGAC CGGCAGCGAT
CTACCCATTT ACGCGCTTTT CAGCTGGCTG AAGGGCGAAG CCCTCCAGGT CGCCGGCTGG
CGCACCAACC TCGATGCCCT GCAGCAGGGG CGCTTGTCGG CCACGCGCGA GCAGCCGCTG
CCTCGCACTA CGCTGCGCAT TGTCTTGAGC CTCTGA
 
Protein sequence
MSQSQLAADH RPLRGRLVLG IVAAATLVAC AQPPRPADAS PDHWSGRLAV QVEDDAGQSF 
SAGFELKGHA SAGQLTLINP LGNIIARVEW TPHRAVLVQG QGRREAASLQ TLVHDLTGSD
LPIYALFSWL KGEALQVAGW RTNLDALQQG RLSATREQPL PRTTLRIVLS L