| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0878 |
|---|
| Symbol | |
|---|
| ID | 4670552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 928288 |
|---|
| End bp | 929517 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639838001 |
|---|
| Product | phospholipase D/transphosphatidylase |
|---|
| Protein accession | YP_985196 |
|---|
| Protein GI | 121593300 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0211881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCCC CCACGCGCGC GCACGCTACC GGCCGAGACC ACCAGATCCA GCTGCTGCAG
GGCACGCAGG AGTTGTTCCC GGCGCTGATC GCCGAGATGG ATGCGGCGCT GTCCGATATC
CAGTTCGAGA CCTACATCTT TGACTGCACT GGCGCGGGCG CCGACGTGGC CGAGGCGCTG
ATGCGCGCAG CCCGGCGCGG CGTGCGCGTG CACCTGGCGC TGGACGGCGT GGGCACGGGG
CGGCTGCCCG AGCCTTGGCG CACCCGCATG GTGCAGGCCG GCGTGCACGT GCAGGTGTAT
TCGCCGCTCG GCCCGCTGGG CCTGCTGCTG CCGATGCGCT GGCGCCGGCT GCACCGCAAG
CTGTGCGTGG TGGATGGCTG CGTGCTGTTC TGCGGCGGCA TCAACGTGCT GGACGACTTC
CACGACCCCA ACCACGGCGC GCTCACCGCG CCGCGCTTTG ACTTTGCCGT GCGCGCCGAG
GGCAGCCTGG TGCAGCAGGC CAGCGAGACC ATGGAGCAAC TGTGGTGGCG CATGCGCGCG
GTGCGCGACG TACGCCAGCG CCGCCTGTCG CTGGCGCTGG CCGACCTGCG CGCCGCCAGC
GCCGCACGCC TGGCGGCGCG GCGCGCCGAG AGCCGTGCGC GGGGCATGCG CGCCGAGCTG
GTGCTGCGCG ACAACGTGCG CAACCGTGCA TGCATCGAGC GCGCCTACCT GCGCGCCATT
GCCCGCGCGC GGCATGAGAT CATCATCGCC AACGCCTACT TCGTGCCCGG TGGCAAGCTG
CGCCGCGCGC TGGTGCTGGC GGCGCGGCGC GGCGTGCGCG TACAGCTGCT GCTGCAGGGG
CGGTACGAAT ACTTCATGCA ATACCACGCA GCGCGGCCGG TGTACGGCAC GCTGCTGGCG
GCGGGCGTGG AGATTCATGA ATACGCGCCC AGCTTCCTGC ACGCCAAGGT GGCGGTGATC
GACGCGGACA GCCGCCGCGC CTGGGCCACG GTGGGCTCGT CCAACCTGGA CCCGCTGTCG
CTGCTGCTGG CGCGCGAGGC CAATGTGATC GTGCGCGACG CCCCCTTTGC CCAGGACCTG
CGCGAGCGGC TGCGCCACGC CATGGCCCAC GAGGGCCGCC AGCTTGACCC GCAGCGCTAC
GCCGAACGCC CCTGGCGCGA GCGCGCGCTG GACCGCATCG CCTTCGGCAT CATGCGCGCG
GCCCTGTGGG TGACGGGCAA CCGCTACTGA
|
|---|
| Protein sequence | MVAPTRAHAT GRDHQIQLLQ GTQELFPALI AEMDAALSDI QFETYIFDCT GAGADVAEAL
MRAARRGVRV HLALDGVGTG RLPEPWRTRM VQAGVHVQVY SPLGPLGLLL PMRWRRLHRK
LCVVDGCVLF CGGINVLDDF HDPNHGALTA PRFDFAVRAE GSLVQQASET MEQLWWRMRA
VRDVRQRRLS LALADLRAAS AARLAARRAE SRARGMRAEL VLRDNVRNRA CIERAYLRAI
ARARHEIIIA NAYFVPGGKL RRALVLAARR GVRVQLLLQG RYEYFMQYHA ARPVYGTLLA
AGVEIHEYAP SFLHAKVAVI DADSRRAWAT VGSSNLDPLS LLLAREANVI VRDAPFAQDL
RERLRHAMAH EGRQLDPQRY AERPWRERAL DRIAFGIMRA ALWVTGNRY
|
|---|
| |