Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0847 |
Symbol | |
ID | 4673900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 893882 |
End bp | 894538 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639837970 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_985165 |
Protein GI | 121593269 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.808062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG AACGGCAGGG CCGGCTGTCG CGCCGCGCCT GCCTGGCTTC GCTGGCGGCG GGGCCGGCTG CATGGCTGGG CGTGGCTGCA CCTGCGCATG CGGGGAGCCA GCTGGAGGAG CCGTTGATCG ATTCCGTGCG CACCGCGCTC AGCTCCGCCG TGGCAGACCT GGCACCGCCC GAGCCGCTGT TTGCCTCCAC CGAGGCACGT CTGCTGTATC TGCGCTGGCT TGGCACCATG AGCGACCGCC TGCGCCGGCG CAAGCCCGAA TGGGAAGTGC GCCGCGACTT CCTGCAGACG GTGTGGTACG AGTCCAAGCG CTCGGGGCTG GATGTGTCGC TGGTCATGGG CCTGATCCAG GTGGAGAGCG CGTTCCGCAA GTTCGCCGTC TCTCCGGTGG GTGCGCGCGG CTATATGCAG GTGATGCCAT TCTGGACCCG CGTGATCGGT GATGGCGACC CGGGCAAGCT GTTCCACATG CAGACCAACC TGCGCTTTGG CTGCGTGATC CTGCGCCACT ACCTCGACCG CGAGCGGGGC GACCTGTACA TGGCGCTGGG CCGCTACAAC GGCAGCCGGG GCAAGGCGCC GTATCCGAGC GCCGTGTTCG CAGCGCAGCG CAACTGGTTC TTCCAGGAGC GTACTTCGGA CGCCTGA
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Protein sequence | MSDERQGRLS RRACLASLAA GPAAWLGVAA PAHAGSQLEE PLIDSVRTAL SSAVADLAPP EPLFASTEAR LLYLRWLGTM SDRLRRRKPE WEVRRDFLQT VWYESKRSGL DVSLVMGLIQ VESAFRKFAV SPVGARGYMQ VMPFWTRVIG DGDPGKLFHM QTNLRFGCVI LRHYLDRERG DLYMALGRYN GSRGKAPYPS AVFAAQRNWF FQERTSDA
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