Gene Ajs_0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0622 
Symbol 
ID4674302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp654962 
End bp655489 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content71% 
IMG OID639837748 
Productrare lipoprotein A 
Protein accessionYP_984945 
Protein GI121593049 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.717997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTCGG CACCGTCTTC TCCGCGTGAA GCCGATACCG CGATCGAGCG CGGCCGCGAA 
GACGAGGAAG AAAGCGGCGT GCTGCTCGGG CGCGGGCTGG CCTCCTGGTA CGGCGGCAGC
CTGCATGGCC GGCGCACGGC CAGCGGCGAG CGTTTTGACC GTGGGGAACT CACCGCCGCG
CACCGCACGT TGCCTTTCGG GGCGCGGGTA TGCGTGCGCA GCCTGGTCAA CGGCAAGGTG
GTGGTGGTGC GCGTCAATGA TCGCGGACCG TTCGCGCCAG GCCGGGTCAT CGACCTGAGC
CAGGCCGCGG CGCAGGAACT GGGCATGGTG GGCCTGGGTA TCAAGCCCGT GGAGATCTGG
CACATGGGGC CGGACGACGA CAGCTGCCCC GAAGATCTGC CGGAGCTGGA CCCGTCGTCC
ACGCCCGCAG CCTCGCCGGC CGCTGCTCCA GCGGGCGCCG CGCAAGCGCG CACAAATCAG
GGCGCAGCGC GCATTACTCC CCGCAAGAGC CGGGCCCGGC GGCGCTAA
 
Protein sequence
MRSAPSSPRE ADTAIERGRE DEEESGVLLG RGLASWYGGS LHGRRTASGE RFDRGELTAA 
HRTLPFGARV CVRSLVNGKV VVVRVNDRGP FAPGRVIDLS QAAAQELGMV GLGIKPVEIW
HMGPDDDSCP EDLPELDPSS TPAASPAAAP AGAAQARTNQ GAARITPRKS RARRR