Gene Ajs_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0519 
Symbol 
ID4672590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp541328 
End bp542296 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content66% 
IMG OID639837648 
Producthypothetical protein 
Protein accessionYP_984845 
Protein GI121592949 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.515073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0234005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGTC GCCGTCAATT GGTGGGTTCC CTTGCGCTGT GCATGGCTTG CGCCGTACAG 
GCACAGAACG CATCCGCCCC CATGACCATC GTGGTGCCCT ACGCGGCCGG AGGCCCGCTC
GACAAGAGCG CGCGCATCCT GGCCGAAGGG GCACAGGCCC AACTCGGGCC CATCCAGGTG
CAGAACAAGC CGGGGGCCGG CGGCAACCTG GGCGCAGACA CGGTGGCCAA GGCGCCCAAG
GGCGGCAACC TGCTGGTGAT GGGCGCGGTC GCCACCCATG CCGTGAACCC CTGGCTGTAC
AAGAATTTCC CCTACAACCC GGTCAAGGAT TTCACGCCCA TCGTGCTCGT CGCCCGCACA
CCGAACGTGC TGGTGATGAG CGCCGAACGG GCCAAGGCGT TGGATATCAG CACCACCACC
GACCTCGTGA AGTACATGAA GGCCCACCCG GACCAGCTCA AGTACGGCTC GGGCGGCAAT
GGCAGCATCG GCCACATCGC CGGGGAGATG TTCAAGTCGC TCACCAACAC GCGCATGCCC
CATGCGCCCT TCCAGGGCGC GGGTCCGGCG CTCAAGGCGC TGCAGGACGG CGGCGTGGAC
ATCGTGTTCG ACAACCTGGC GTCGTCACTG CCGCTGATCC AGGGCGGCAA GCTCAAGGCG
CTGGGCGTGA CATCGCTGGG CAGCGACGAC GCCCTGCCCC ACGTGCCCAG CATCAACAGC
GAGGTGCCCG GCTTCAACGT GTCCACCTGG TTCGGGCTGT TTGCCCCCGC CACGCTGCCC
GCCGCCGATG CACAGAAATA CGCCACGGCG TTCTCGAAAG CCATGCACTC GCCGGCCGGC
AAGGCGCAGT TCCAGAAGAT GGGCCTGACG CCCGAAGAAC TCACGCTGGG CGGCTTCGGC
AGCTTCGTGC GCTCGGAACT GGGCAAGTAC GAATTCCTCA TCAAGGCCGC CAAGATCCAC
ATCGACTGA
 
Protein sequence
MLRRRQLVGS LALCMACAVQ AQNASAPMTI VVPYAAGGPL DKSARILAEG AQAQLGPIQV 
QNKPGAGGNL GADTVAKAPK GGNLLVMGAV ATHAVNPWLY KNFPYNPVKD FTPIVLVART
PNVLVMSAER AKALDISTTT DLVKYMKAHP DQLKYGSGGN GSIGHIAGEM FKSLTNTRMP
HAPFQGAGPA LKALQDGGVD IVFDNLASSL PLIQGGKLKA LGVTSLGSDD ALPHVPSINS
EVPGFNVSTW FGLFAPATLP AADAQKYATA FSKAMHSPAG KAQFQKMGLT PEELTLGGFG
SFVRSELGKY EFLIKAAKIH ID