| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0327 |
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| Symbol | |
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| ID | 4673730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 336684 |
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| End bp | 337814 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639837458 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_984656 |
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| Protein GI | 121592760 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.270074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGA AGTTTTCAAA GGCAGCCGGT GCGGCTTTGG CTGTGGTTGC AGCAGGCATG
TTGATGGCAT GCGGCGGTCA ACCCGGGGGG CAGGGCGGCC CGCAGGGCCC TGCTGCCGTG
GGCGTTTTTG CCGTGCAGAC CCAGGCGGTG ACTTTGAGCA CCGAATTGCC CGGCCGCACC
GTTGCCTCGC GCGTGGCCGA GGTACGCCCC CAGACCAGCG GCATCGTGCA AAAGCGCCTG
TTTGAAGAAG GCAGCGTGGT CAAGCAGGGC CAGGCGCTGT ATCAGATCGA CCCGGCCACC
ATGAATGCGC GCCTGGTCAA GGCCCAGGCG CAGTTGCAAA GCACAGAGAA CCTTGCCAAG
CGCTACGCCG TGCTGCGCGA GAAAAACGCC ATCAGCCAGC AGCAGTACGA CGACGCCATG
AGTGCGTGGC GCAATGCGCA GGCCGACGTG GAGCTGGCAC GCATCGACAC CGTCTATGCC
AAGGTGCTGT CGCCCATTTC GGGCCGCATC GGCCGCTCGC AGGTGACCGA AGGTGCGCTG
GTCGGCGTGG GCCAGGCGCA GCCCATGGCG ACTGTGCAGC AGATCGATCC CATGCATGTG
GACATGCAGC AGTCCATGAC GGACATCCTG CGCCTGCAGG CCGCCAACGC CCAGGCCAGC
GCCAATGTGC GCCTGGTACT GGAGGATGGC AGCGTCTATC CGCTGGAGGG CACGCTCAAG
TTTTCTGAGG TCAATGTGGA TGAAAGCACG GGCTCGGTGA CCTTGCGCGC CACTTTTGCC
AACCCCGACG GCCTGCTGCG CCCGGGCATG TTTGTGCGCG CCCAGCTGCA GACGGGCACC
AAGCCGCAGG CGCTGCTGGT GCCGCAGCAG GCCGTGTGGC GCAACACCCA GGGCAAGTCC
ATGGTCTGGG TGGTGGGCGA TGACAACGTG GCCAAGCCGC GCCCCGTGAA CGCGGTGCGC
ACGGTGGGCA ACACCTGGCT GGTGGAAGGC GGCCTGCAGT CCGGCGAGCG CGTGATCACC
GAAGGCCTGC AGAAGCTGCG TGGCGAGATG CCAGTGCAGC CGGTGCCTGC CCAGAACGTG
GACATCGTGA CCGACCTGTA CGCCGTGAAC GCCGTGGGCA AGGGCGACTG A
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| Protein sequence | MSVKFSKAAG AALAVVAAGM LMACGGQPGG QGGPQGPAAV GVFAVQTQAV TLSTELPGRT
VASRVAEVRP QTSGIVQKRL FEEGSVVKQG QALYQIDPAT MNARLVKAQA QLQSTENLAK
RYAVLREKNA ISQQQYDDAM SAWRNAQADV ELARIDTVYA KVLSPISGRI GRSQVTEGAL
VGVGQAQPMA TVQQIDPMHV DMQQSMTDIL RLQAANAQAS ANVRLVLEDG SVYPLEGTLK
FSEVNVDEST GSVTLRATFA NPDGLLRPGM FVRAQLQTGT KPQALLVPQQ AVWRNTQGKS
MVWVVGDDNV AKPRPVNAVR TVGNTWLVEG GLQSGERVIT EGLQKLRGEM PVQPVPAQNV
DIVTDLYAVN AVGKGD
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