| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0084 |
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| Symbol | |
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| ID | 4674537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 88553 |
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| End bp | 90424 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639837216 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_984415 |
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| Protein GI | 121592519 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCCCCG CGCATTTCGT CCTGCACGAC GTCTTTGGCT ACGAGCAGTT CCGTGGCCCG
CAGCAGGCCA TCATCGACCA TGTGATCGCC GGCGGCGACG CGCTGGTGCT GATGCCCACG
GGCGGCGGCA AGAGCCTGTG CTACCAGGTG CCGGCCATCG TGCGGCGCGA TGCGGGGCTG
GGCGTGACGG TGGTGGTCTC GCCGCTGATC GCGCTGATGC ACGACCAGGT GGGCGCGCTG
CACGAGGCGG GGGTGGAGGC GGCCTTCCTC AACTCCACGC TGGACTGGCA GCAGACGCAG
GACGTGGAGC GGCGCCTGGC GCGCGGCGAG ATCACGCTGC TGTACGCCGC GCCCGAGCGC
GTGACCACCG ACCGCTTTCT CACGCTGCTG GACGGTCTGC ATGCGCGCGG GCAGTTGGGG
CTGTTCGCCA TCGACGAAGC GCATTGCGTG AGCCAGTGGG GCCATGACTT CCGCCCCGAG
TACCGGGCGC TGACGCTGCT GCACGAGCGC TATCCGCAGG TGCCGCGCAT TGCGCTGACG
GCCACGGCCG ATGCCCTCAC GCGCGAAGAC ATCATCGAGC GGCTGCAGTT GCAGGACGCG
CGCCTGTTCA TCAGCAGCTT TGACCGGCCC AACATCCGCT ACACCATCGT CGAGAAGAAG
GATGCCACCA CGCAGCTGCT GCGCTTCATC GAGCGCGAGC ATTCGGGCGA GGCGGGCGTG
GTGTATTGCC AGTCGCGCAA GCGCGTGGAG GAACTGGCGG CCACGCTGCA GGATGCGGGC
ATCAACGCCC TGCCCTACCA CGCAGGGCTC GATACCAAGG TGCGCCAGAA CCACCAGGAC
CGCTTTCTGC GCGAAGAAGG CATCGTGATG GTGGCGACGA TTGCGTTTGG CATGGGCATC
GACAAGCCCG ATGTGCGCTT TGTGGCCCAT GTGGACATGC CCAAGAACAT TGAAGGCTAT
TACCAGGAAA CCGGCCGCGC GGGCCGCGAT GGGTTGAACG CCGACGCCTG GATGGCCTAC
GGCCTGCAGG ACGTGGTGAA CCAGCGCCGC ATGATCGACG AGAGCCCCGC GGGCGAAGAG
TTCAAGGCCG TGATGCGCGG CAAGCTCGAT GCGCTGCTGG CCCTGGCCGA GGCCACGGAC
TGCCGGCGCG TGCGGCTGCT GGGCTACTTC GGCGAGGCGT CCGAACCCTG CGGCAATTGC
GACAACTGCC TGAATCCGCC GGCCGTGTGG GACGGCACGG ATGCCGCGCG CAAGCTCCTG
TCCACCATCT ACCGCGTGCA CGAGGCCAGC GGCCTGACCT TCGGCACGGG CCACATCATG
GACATCCTGC GCGGCAAGGC CACGGACAAG GTCCAGCAGT TCGGCCATGA AAAACTCTCC
ACCTTCGGCC TGGGCGCACA GTATTCCGAG GCGCAGCTGC GCGGCGTGCT GCGCCAGTTG
CTGGCCGCCG GCGCCGTGGG GCTGCACAAG GTCACGACCG AGGGCGGCCA CAGCTTTGAC
ACGCTGGCGC TGACCGAGGG ATCGCGCCCC GTGTTGCGCG GCGAGCAGAG CGTGCTGCTG
CGCGAGGCCA CGGCCGCGGC CGGCCCCAAG AAGCCGCGCC GCGCCAGCGC CCCGCCGGTG
GCAGCGGCCA ACCTGGGACA GGACGCGCAG GTGCGCTTCA TCAACCTCAA GGCCTGGCGC
GCCGAGGTGG CGCGCGAGCA CAACCTGCCG GCCTACGTGA TCTTCCACGA CGCCACGCTG
GCCGCCATTG CCGAGCGCAA TCCGTCCACG TTGGAGGATC TGCAGGGCAT CAGCGGCATG
GGTGCGAAAA AGCTGGAGGC GTACGGCGCC GAAGTGCTGC GGGTGTGCGG CGCCGGGGCC
GCGGCCGGCT GA
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| Protein sequence | MSPAHFVLHD VFGYEQFRGP QQAIIDHVIA GGDALVLMPT GGGKSLCYQV PAIVRRDAGL
GVTVVVSPLI ALMHDQVGAL HEAGVEAAFL NSTLDWQQTQ DVERRLARGE ITLLYAAPER
VTTDRFLTLL DGLHARGQLG LFAIDEAHCV SQWGHDFRPE YRALTLLHER YPQVPRIALT
ATADALTRED IIERLQLQDA RLFISSFDRP NIRYTIVEKK DATTQLLRFI EREHSGEAGV
VYCQSRKRVE ELAATLQDAG INALPYHAGL DTKVRQNHQD RFLREEGIVM VATIAFGMGI
DKPDVRFVAH VDMPKNIEGY YQETGRAGRD GLNADAWMAY GLQDVVNQRR MIDESPAGEE
FKAVMRGKLD ALLALAEATD CRRVRLLGYF GEASEPCGNC DNCLNPPAVW DGTDAARKLL
STIYRVHEAS GLTFGTGHIM DILRGKATDK VQQFGHEKLS TFGLGAQYSE AQLRGVLRQL
LAAGAVGLHK VTTEGGHSFD TLALTEGSRP VLRGEQSVLL REATAAAGPK KPRRASAPPV
AAANLGQDAQ VRFINLKAWR AEVAREHNLP AYVIFHDATL AAIAERNPST LEDLQGISGM
GAKKLEAYGA EVLRVCGAGA AAG
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