Gene Pnap_4114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4114 
Symbol 
ID4688658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4401148 
End bp4401465 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content58% 
IMG OID639837126 
Producthypothetical protein 
Protein accessionYP_984325 
Protein GI121606996 
COG category[S] Function unknown 
COG ID[COG0759] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00278] conserved hypothetical protein YidD 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.049337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0907905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAA TTCTGACTAC CCTGACACGC CTGCCGCAAA TGACTCTGAT CGGTGTTGTC 
AACGGCTACC GGCTGCTGAT CAGTCCCGCG CTGGGTTCAA ACTGCCGGTT TGAGCCCAGT
TGTTCTGCTT ATTCCCTGCT GGCACTGAGC CGGCATGGTG CAGTCACGGG AAGCTACCTG
ACACTGCGCC GTCTTGTTCG TTGCCAGCCT TGGTGCGAAG GTGGGCATGA CCCGGTGCCG
CCGCCACAAT CTGCTTCTTT TTTCAGCCGC CTGCTCACGC CTGCGGCTTC CATTCCTTCT
AAAAAGACGC CGTCATGA
 
Protein sequence
MNPILTTLTR LPQMTLIGVV NGYRLLISPA LGSNCRFEPS CSAYSLLALS RHGAVTGSYL 
TLRRLVRCQP WCEGGHDPVP PPQSASFFSR LLTPAASIPS KKTPS