Gene Pnap_4111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4111 
Symbol 
ID4686186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4397306 
End bp4397797 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content54% 
IMG OID639837123 
Productcyclic nucleotide-binding protein 
Protein accessionYP_984322 
Protein GI121606993 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.670984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.130991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAC TACTTCCCGG CGCAATCCGC TTTGATATTC AGACCCTGGC CCAGGCTGTT 
GCAAGCTGTA AGTCCAGTGA TGCCTTGCAT TGTCAGTTCA GCTTGCCGAA CTGGACTATT
TTGGGCGCTT TCCTGCAGCC CTTTCCCTTG AGCAAGGGGC AAATCCTGAT AGAGCAGGGA
GCTCGGGACT GCACCTTGTA TTTCATTGAA AGCGGCACCT TGAGTGCTCA TTCAGAGGAT
GAAAATGCAC ATATGCACCT GGCCTTGGTG GGCTCAGGAA CTGTATTGGG CGAAGGTTCA
TTTTTCACGC ATCAGCCGCG CAGGGCGACA GTCCATGCTT CAAGCCCATG CAAAATGTGG
TGCCTCACGC CGATACGCTT CAAGGATCTG TCACGCCACC ATAGTCCCAT AGCGCTCGAA
TTAACTCTGG CGATGGGCTC CGTCATGGCC AAGCGCCTGA GCATTCCGCC AAAACGGGCC
GCTGTGACTT GA
 
Protein sequence
MNALLPGAIR FDIQTLAQAV ASCKSSDALH CQFSLPNWTI LGAFLQPFPL SKGQILIEQG 
ARDCTLYFIE SGTLSAHSED ENAHMHLALV GSGTVLGEGS FFTHQPRRAT VHASSPCKMW
CLTPIRFKDL SRHHSPIALE LTLAMGSVMA KRLSIPPKRA AVT