| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4095 |
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| Symbol | |
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| ID | 4688084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 4379823 |
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| End bp | 4380980 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639837107 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_984306 |
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| Protein GI | 121606977 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.646881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTTT TCAAGGTTTC CATCCCATCA TTATCGGTGA TTCAAAAACA CTTGCAGGAA
ATATGTTTGT GTGAGTCAAT AACACCTGTG AAAACGATCA AGACCCTCAA GCTGCGCATC
AAGGACAAGC ACGCCAGCGC GCTTGCGGCG ATGGCGCGTG AGGTCAATCA GGTCTGGAAC
TACCTCAACG AGTTGTCGCA CCGCTCCATC CGTGAGCGTC AGAAGTGGCT GAGCGCCTAC
GACTTGCAAA AGTACACCGC CGGGTTCAGC AAGTGCGAAG GCGTCAAGGT GGGCAGCGCC
ACCGTGCAGC TGGTCTGCGA GGAATACGCC ACCCGGCGCA GGCAGTTCAA GAAAGTCCGA
CTGAACTGGC GTGTATCCAA CCCGAAGTCG CCGAAGCGCT CGCTGGGCTG GATACCGTTC
AAAAAGGGCG GCGCTGCGTA TCGCAACGGG CAGGTGAAGT TCTGCGGCTT GAGGCTGGGC
CTGTGGGACA GCTATGGGCT GAGCCAGTAC GAACTGCGCG CTGGCTCGAT CAGCCAGGAT
GCGCGGGGCC GGTGGTATTT GAATGTGTGC GTTGAGGTCG AAGCCAGGAA AAGCGCGGGT
ACCGCCAGCG TGGGTATCGA CCTGGGATTG AAAACCTCTG CGGTTTGCTC CAATGGCGAC
GCATTGGCAT CGCGCATTTA CCGCCAATAC GAGCCCGCGC TGGCGATGGC CCAACGCGCA
GGCAAGAAGG ACAGGACGCG GGCGATACAC GCCAAGATTG CCAACGTCCG CAAAGACGCC
ATGCACAAGT TCAGCACCCG GCTGGTCAAG GAGAACGCCG CGATCTTCGT GGGCAACGTG
TCAAGCCAAG CGCTGATCAA GACGAAGATG GCCAAGTCCG TACTCGATGC GGGCTGGTCA
ACACTGAAGA CGATTCTGCA ATACAAGAGC CATCAGGCCG GTATCGTCTT TGAAGAGGTG
AGTGAAAGTT ATACAACCCA GACTTGCTCG TGCTGCGGGG TTATTCCCGC CAGCAGTCCG
AAGGGTAGAG CAGGCCTTGG AATAAGAGAA TGGGCTTGCA GCGACTGTGG CTCGGTACAC
CACCGGGACA CAAACGCAGC CAAGAACATT CTTGCGCGAG GACATTCGCG TCTAGCTGTA
GGAATCCCCT CCCTTTAG
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| Protein sequence | MGFFKVSIPS LSVIQKHLQE ICLCESITPV KTIKTLKLRI KDKHASALAA MAREVNQVWN
YLNELSHRSI RERQKWLSAY DLQKYTAGFS KCEGVKVGSA TVQLVCEEYA TRRRQFKKVR
LNWRVSNPKS PKRSLGWIPF KKGGAAYRNG QVKFCGLRLG LWDSYGLSQY ELRAGSISQD
ARGRWYLNVC VEVEARKSAG TASVGIDLGL KTSAVCSNGD ALASRIYRQY EPALAMAQRA
GKKDRTRAIH AKIANVRKDA MHKFSTRLVK ENAAIFVGNV SSQALIKTKM AKSVLDAGWS
TLKTILQYKS HQAGIVFEEV SESYTTQTCS CCGVIPASSP KGRAGLGIRE WACSDCGSVH
HRDTNAAKNI LARGHSRLAV GIPSL
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