| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4086 |
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| Symbol | |
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| ID | 4686153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4367746 |
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| End bp | 4370757 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639837099 |
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| Product | pentapeptide repeat-containing protein |
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| Protein accession | YP_984298 |
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| Protein GI | 121606969 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.791775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.807746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAC ACCGCCTTGC CCCGGTTCTA CTGGCCGCAG CTGTTCTGGC TGCGTCCTGC
GGCGGCGGTG ACACGCCATC CCCGGCAGGC GGCACCGGCA TCAACACCGG GGTCAGCCCC
GGCACCGGCA GCGTGCCGCT GTACCAGTCC TCCACCGAGA CGCTGACACT GCCGCAGCTG
CGGGTAGCCG GCAACATCCG GGCCGATGTC AAGCTTGTGC TCAAGAAGGA CGGCAACTGG
GCGCTGCTTT CCTCCGGCCC GACTCGTCCC GCCACCGCAT CCGACACGCC CGGCGCCGCG
CTGGCCGCGC CCGGCGGCAA CACCGACCTG GGCGGCACGC AGACCGACAC GACGCTGACG
GTGGCGCGGC TGCACGTAGG CTCTCGCGTG TTTGGCAACG TGGCGGTCCG GCTCACCGGC
AAGGCCTGGG CCTTTGTGAG CAGCCCGCAA GAGGTGAAGA CGCTGCACCA GGAGGACTTC
AAATCCAACA CGGCGATTCG CGCCGACGAG TCGCACCACG TCATCCTTCA ATCCAGCCCG
GACAGCGGTG TGCAGAACGT GCCGATGCAG TTGTCCGGCA GAAACTACAA GTTCTGCATG
GACGCGCAGG CCGAGGGCGC CGACAGCACG ACGCTGCTGG ATGCGGCGGG CCATACCATT
TTTACGCTCA AGGCGGGTGA GCCTTGCGTC ACCCTCCAGG CCAGGGAGGG GGCGTACACC
CTGCAGCACC GCTATGGCGG CACCGGCAGC GCCCGCACCC TGTTCATGCG CAACCAGGCC
AACACCACGA CAGCCACTGC GCTGGCGGCG CAAGCAGCGT CCGCACCGCC CGGTTTGCTC
AACGCGCCCA AGCTGCTGGC CGCTTCGGCA ACCGCGACAA ACGCCATGGC GCCGGTCGCC
GAATACTGGT CTGTCCGCAA CCCAGCGGCA AATTCCGGCG CGCAACCCAG ATCGCTCGGA
AATGCGGGTA CTTTTTACGC GGAGCCGGTT TATGGGCTTG ATGCTCTCGG CACGGGCTGC
AACGGAAAGA TCGCCTTCAG CTTCATGAAT CCCTGGAGCG CCCAGGCACT ATTTCGCATC
GACAAGAATG CTTTCAACGT ACCCGTCTAC ATGGGCGTTC CTCTTGGATG TGAGTTTTAT
GCGATGGAGC TTTATTCTGG AACGGGTTCG ATTCCACCGT TCGTATACGG CAACGCCATT
TACCCTCAAT ACGACCCCAC GCTGGCATCC ACCCTCTGGA ACAGCGGGCT TGGCACCACC
TACGCCAGCC TGGTAAAGGA TGACTACCTG ACAGAAGTGG ATGACAACTC TCTGCGCCTG
TATCCAACGC TTGGCCTGGA TGCTTTTGTC GTGCCGTCGC ATCCGACCGT CACCATTGGC
GGGGTGGCGT ACCCCGCTCC AATTCCGATG CCAGATCCGA ACGCGCCTGA GGGCTTCTAC
AGCATGGGCG GTTTTTTTGC GAGTTCCACC CTGGTGGAAC GCAGGCAACA AACCATCACC
GAACAGTCAA GCACGCGCTT TACCCTGGCG TCCATGTATT CGACCGTGTA TTCGCCGGCG
GGTGTACAGG TGAGCAGCGC GACGGCACCT GTTCTGGCCA CCAGCGACTC CCTGCTCACG
GTGGGAAATG CAGCCGCAGG CGATGTGGCC TCCTCGCTCT CGATTGCCTA CCGCTATTAC
CCAGACGGAC CGCCATCGGC TGTTTTAGGT TTCGGCCAGA TTGCGCTCTA CACCGGGCCC
AACTGCACGG GCGCCGTGGT CATGCCACAG GCTGACGTGC CGACCTTCGA CGTCTCGGGC
GCTCCTGCGC TCAAGGGACT TGGCACCTCG TTCAAGCTGG GCCTGCAGAC CAGCGCCACG
GCTTTTTCAT TGCCGCTGTA CAACGGCGAG CAGCAGCACT TTGACCAGCT GACCTGCTAT
TCCGGCGGCT TTGGCTCAAC AGGCTGGACG CCCCAATCCA TGCAGATCGC AGTGGACACC
GTCACCATGG TCATCAGCAC CGACTCGTGT GAATACTGCA ACCTGGCCGG TGTCGATTTT
TCCGGCGTCA ACCTCACCAA CGTCAAGCTG AGCTACGCCA ACCTGAACGG CGCCATCCTG
TCCAACATCG ACCTGTCGGG CGCGGACCTG CGCAGCGTCA GCCTGCAGGG CGCCTACCTC
ATCAATGCCA ATCTGGACGG CGCCAATTTA TGCGCGGCGC AATTGAACGG CAGCCAGGGC
GTCACCCAGG CGGCCACGCT GACCGGGGCG CACCTGCGCA ACACCAACCT GGCGCTGTCC
AACCTCGATG GCGTGAAGCT GTCATCAGCC AGCTTTTACA GCAGCAATGG GCAGGGCACC
TGCCAGCAGA CCAGCTGCAG CAGCTATGTG GCCTCCACCT GTGCCAGCGC CTACAACGCC
TCCCTCAACA ACGCGAGTTT TGATTCGGCC TACCTGTCCA ATGTCGATAT GAGCAACGTC
ACCGGCGCGG GTGTCAGCTT CAACAACGCC GCCTTGTTTG GCGTGCTGTT TGGCCAGGCC
AATTTGGCGC ACAACAAGCT TTCATCCGTC AGTTCATCCT TCATCAATGC CTACCTGCAG
GGAACCGACC TGTCTCGCGC CAACCTGCAG TTCGCAGACT TCACGGGGGC GCAGTTTGAT
GCGGCCAGCA ATTGCATCCA GGCCAATTTA AACCCCGCCT ATTCAAACTT CCCCGGCGCC
AAGGTGCCCG CCAGCCCGGG CAGCTCGACC TGCGTGCCGG GCAAGCCTGC TGCGGCGTTT
TGCGTCCAGT CTTCTTTCGC CCCATCGGCG GGCTACCCCC AGACCGACTG CACCAACATC
TGCGCCGATG GGAGCACGGC AGGCGTCGGG CTGACCAATG GCACCTGCCC GAACGCTTTC
ACCTGCTCCT CGGCAAGCTG GACCACGCCG CTGAACGGCG GAGGCAACGG CGCCATGCCC
ACCAGCAACT GCCAGGGCGC AGCGGCGCTG TGCGGCAACC CGTTCACGGG CGGCGCCGAC
CCGTGCTGGT AA
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| Protein sequence | MMKHRLAPVL LAAAVLAASC GGGDTPSPAG GTGINTGVSP GTGSVPLYQS STETLTLPQL
RVAGNIRADV KLVLKKDGNW ALLSSGPTRP ATASDTPGAA LAAPGGNTDL GGTQTDTTLT
VARLHVGSRV FGNVAVRLTG KAWAFVSSPQ EVKTLHQEDF KSNTAIRADE SHHVILQSSP
DSGVQNVPMQ LSGRNYKFCM DAQAEGADST TLLDAAGHTI FTLKAGEPCV TLQAREGAYT
LQHRYGGTGS ARTLFMRNQA NTTTATALAA QAASAPPGLL NAPKLLAASA TATNAMAPVA
EYWSVRNPAA NSGAQPRSLG NAGTFYAEPV YGLDALGTGC NGKIAFSFMN PWSAQALFRI
DKNAFNVPVY MGVPLGCEFY AMELYSGTGS IPPFVYGNAI YPQYDPTLAS TLWNSGLGTT
YASLVKDDYL TEVDDNSLRL YPTLGLDAFV VPSHPTVTIG GVAYPAPIPM PDPNAPEGFY
SMGGFFASST LVERRQQTIT EQSSTRFTLA SMYSTVYSPA GVQVSSATAP VLATSDSLLT
VGNAAAGDVA SSLSIAYRYY PDGPPSAVLG FGQIALYTGP NCTGAVVMPQ ADVPTFDVSG
APALKGLGTS FKLGLQTSAT AFSLPLYNGE QQHFDQLTCY SGGFGSTGWT PQSMQIAVDT
VTMVISTDSC EYCNLAGVDF SGVNLTNVKL SYANLNGAIL SNIDLSGADL RSVSLQGAYL
INANLDGANL CAAQLNGSQG VTQAATLTGA HLRNTNLALS NLDGVKLSSA SFYSSNGQGT
CQQTSCSSYV ASTCASAYNA SLNNASFDSA YLSNVDMSNV TGAGVSFNNA ALFGVLFGQA
NLAHNKLSSV SSSFINAYLQ GTDLSRANLQ FADFTGAQFD AASNCIQANL NPAYSNFPGA
KVPASPGSST CVPGKPAAAF CVQSSFAPSA GYPQTDCTNI CADGSTAGVG LTNGTCPNAF
TCSSASWTTP LNGGGNGAMP TSNCQGAAAL CGNPFTGGAD PCW
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