| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4011 |
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| Symbol | |
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| ID | 4687843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 4274678 |
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| End bp | 4276150 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639837025 |
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| Product | exoribonuclease II |
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| Protein accession | YP_984224 |
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| Protein GI | 121606895 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCCA TCAACCTCCA CCAGATCGCC GTCGAAGCCA TGCGCGCCCG GGGCCTGCTG
CCCGCCTTTG CGCCGCAGGC CTTGCAAGAG GCCGAGGACG CGCGCCAGAC CAGCCCTGAG
CGCGACGGCG CCATCCGCGA CCTGCGCCAC CTGACCTGGT TTTCCATCGA CAACGACGAC
ACGCGCGACC TGGACCAGTT GAGCGTGGCC GAGCCGCTGT CCGCCGGCAG CACGCGCCTG
CGGGTGGCGG TGGCCGACGT CGACACCCTG GTGCGGCCCG GTGGCGCGGT GGATGGCCAT
GCGGGCGCCA ACACCACCTC GGTGTACACG GCGGCCGGAG TGTTCCCGAT GCTGCCCGAA
GTGCTGTCCA CCGACCTCAC CTCGCTGCAC GAGGGCCAGG AGCGGCTGGC GGTGGTGGTC
GACATGCAGG TCGCGGCCGA CGGCACGGTG CCGGCCTCAA GCGTCTATCG CGCATGGGTG
CTCAACCGCG CCAAGCTCAC CTACGACGGC GTCTCGGCAT GGCTCGACGG CACAGCGCCA
GCGCCGCCGC AGATCGCCAG CGTGCCGGGG CTGGAGGACC AGCTTCGCCT GCACGACGCG
CTGGCCGGTC AGTTGCGGCA ATGGCGCCAG ACGCGCGGCG CGCTCAATGT CAGCACGCTG
TCCGCGCGCC CGGTGTTCGA TGGAAACGGG CAACTGGTGG ACCTGCGCGC CGACAACAAG
AACCGCGCCA AGGACCTGAT CGCCGACCTG ATGATCGCGG CCAACGGCGC GACGGCGCGG
TATCTGGCGG ACCAGGGTTT CCCGTCGCTG CGGCGGCTGC TGCAGGCGCC GCGCCGCTGG
GACCGCATCG CCCTGCTGGC CTCTAGCCAC GGCGTGCAGC TGCCGGCAAC GCCCGATCCG
CTGGCGCTGG ACCGCTTCCT GAGCGCGCGC CGGCTGGCCG ACCCGGCCGG TTTCGCCGAC
CTGTCGCTGG CGGTGGTGAA GCTGCTGGGC TCGGGCGAGT ACGCGGCCGC GCCCGCTGTG
GCGAACGGTG CTGCGGCTGC AACGGGATTG GGGCACTTCG GGCTCGCGGT GAACGACTAC
GCGCATTCCA CCGCGCCCAA CCGGCGCTTT CCCGACCTGG TGACCCAGCG CCTGCTGAAG
GCCGCCATCG CGGGCGAGGC GCCGCCCTAT TCGGCCGGGC AGCTGGCCGA AATCGCCCAG
CATTGCACGC TGCAGGAGGA CAACGCCAGC AAGGTCGAGC GCCAGGTGCT CAAGGCGGCG
GGCGCCTGGC TGCTGCACGG GCGCATCGGC GAGGTCTTCG ACGCCATCGT CACCGGCGCG
GCGCCCAAGG GGACGTTCGT GCGCATCGGC AGCCCGCTGC TCGAAGGCCG GGTGGTGCGC
GGCTTCGAGG GGCTGGACGT GGGCGATGCG GCGCGCGTGC GGCTGCTGGC GGTGGATGCG
GAAAAAAGCT ATATCGACTT CGAGCGCGCC TGA
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| Protein sequence | MNPINLHQIA VEAMRARGLL PAFAPQALQE AEDARQTSPE RDGAIRDLRH LTWFSIDNDD
TRDLDQLSVA EPLSAGSTRL RVAVADVDTL VRPGGAVDGH AGANTTSVYT AAGVFPMLPE
VLSTDLTSLH EGQERLAVVV DMQVAADGTV PASSVYRAWV LNRAKLTYDG VSAWLDGTAP
APPQIASVPG LEDQLRLHDA LAGQLRQWRQ TRGALNVSTL SARPVFDGNG QLVDLRADNK
NRAKDLIADL MIAANGATAR YLADQGFPSL RRLLQAPRRW DRIALLASSH GVQLPATPDP
LALDRFLSAR RLADPAGFAD LSLAVVKLLG SGEYAAAPAV ANGAAAATGL GHFGLAVNDY
AHSTAPNRRF PDLVTQRLLK AAIAGEAPPY SAGQLAEIAQ HCTLQEDNAS KVERQVLKAA
GAWLLHGRIG EVFDAIVTGA APKGTFVRIG SPLLEGRVVR GFEGLDVGDA ARVRLLAVDA
EKSYIDFERA
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