Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_4010 |
Symbol | |
ID | 4688807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 4273692 |
End bp | 4274552 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639837024 |
Product | hypothetical protein |
Protein accession | YP_984223 |
Protein GI | 121606894 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.763582 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAAAC AGATACCGTC ATCCTTGATA GCCATCGTGT CAGACCTTGT CTCCTCACAC GAAACACATG CAAGCCTTGA CAGTTTGTTT ATGTATGCAG AGGCTTCAGG CGAGCCGCCT GAAGGCAGCA AGCACGTCAA GGCGCAAGAG TGGCTACGTC ATACAAATAA AGTCCATCCC GAACCTTTGG CGGTCCTTGG GAAGATCATT TGCGGCTACA TAGAAGACCC TGTAATGGCA GCTGACTTCA AGGTGTCCGA GTGGATCGCA GAGCATGAAT CCGTCATCAA GAAGCGCGAG AACGTGCGCA AGATTGAAGT TGTTCTAGCC AGGAACGGTC TTCAATATCG GATTGGAGGC CTGCTTACGA CTGGAGGCAT GGCGCCAAGC AAAACCCTTG GGGAGCTTAT CAAAGGCAGA GAGATGCCAG CTATCCACCG CGAGTTTGAT CGAGCCATGG AAACGGTGAC TGGTAAACCG CGCGAAGCTG TATCCGCCGC GTCAAACATT CTGGAGTCAA TCTTCAAAAT CTATATCGAG GACAACAACC TGCGCATGCC GGAAAAGCAA GACCTGCAAC CTGTTTTCAA GGTGGTGCGG GCAGACTTAG GACTCGATCC TGGCAGCGTC GAGGATCAGG ACTTGCAACG AATCATCAGT GGCTTGTTCT CGATTGTTGA CGGCATTGGT GCGCTGCGTA CGCATGCCGG GAGCGCACAC AGCGAAGGAC GCAAAGGCTA CAAATTGGAA CCCCGCCACG CACGTTTAGC CGTAAATGCC GCTCACACGG TCGCTACATT TGTAATGGAA ACTTGGGACA AGAAAGAGTC GGCGAAATCA GGGCATGTCG GCCAGAGTTA A
|
Protein sequence | MNKQIPSSLI AIVSDLVSSH ETHASLDSLF MYAEASGEPP EGSKHVKAQE WLRHTNKVHP EPLAVLGKII CGYIEDPVMA ADFKVSEWIA EHESVIKKRE NVRKIEVVLA RNGLQYRIGG LLTTGGMAPS KTLGELIKGR EMPAIHREFD RAMETVTGKP REAVSAASNI LESIFKIYIE DNNLRMPEKQ DLQPVFKVVR ADLGLDPGSV EDQDLQRIIS GLFSIVDGIG ALRTHAGSAH SEGRKGYKLE PRHARLAVNA AHTVATFVME TWDKKESAKS GHVGQS
|
| |