Gene Pnap_4005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_4005 
Symbol 
ID4686366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4269356 
End bp4270468 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content70% 
IMG OID639837019 
Producthypothetical protein 
Protein accessionYP_984218 
Protein GI121606889 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.215116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTCAA CACTTTCCCC ATGGCGGCTG GTTCATCTGG CGCTGCTTGC GTCTGCCTTG 
GCCTTGAGCG CTGGCGCCAG CGCGCAACCG GCGCCGCCCA GCCTCCAGCC CGACAGCGGG
CCGTGGAAAA GCGGCGCGGG TTTTGACTTT GACCTGGGCA AGAAAAAACT GAAGAAAACC
CGCCAGTCGG TCAGCGGCAT GGCCTGCAAC CTCGATGCCC GGCAGCAGCG CGTTTGCCTG
GTGGTTTTTG ACGAAGGCGC GCAGGCCCGC TATGCATCCG TGGGCGACAA GGCATTGACC
CCCGCTGCCG AACCCGTGGT GCTGCGCGCC ACGGCCGACG AGCTGGATGC CGAGGGCGCG
GCCACGGACG GGCGGTATTT CTACGTCACC GGTTCGCACT CGGCCAAACG CAACGACTGC
GCCAGCAACC CCGGCAGCCG CCATGTGCTG CGCTTCAGGC TGGACCCGGC CACCGGCCGC
GCCAGCCGCG CGCAGGCGGA CTTTGCCGAC AGCGGCCGGC TGTGGCCGAT CATGCAGGCG
CAGCCCGAAC TGGCACCCCA CGTCGGCGAG CGCAAATGCC TGGGTTCCGA AGCCCCTCCC
GAGGCGCCCA GGCTGGCCGG CCAGCAAGGC GTGAACATCG AGGGCCTGGC GGTGCAGGGC
GGGCGGCTCT ACTTTGGCTT TCGCGGCCCG GTGTCAAAGG GCGTGGCCCA GGTGCTGGCG
GTCGATGCCG ACGCGCTGTT CGACCCCCAG GCGGCCCGCG ACCCCAAGGC GACGATCACC
CGCCTGGCGC TCGGCCCCAA CCGGGGCATT CGCGACATGG TGGCCGTCAA GACCGGGTTG
CTGCTGCTGG CCGGGCCGGA CGACAGCAGC GCCAGCCAGG GCGCGGGCTG GACGGTGGCG
TGGTGGGACG GCAAAACCGC CGCAGGCAGC GTGGTGCAGC CCAGGGTTCT GGCAGCGCTG
GACCTGAGCG GCGTGAAATT GCGCAAGTGC GACAAGGAAC TCAAGCCCGA GGCCATGACG
GTGCTGGAAG AAACGCCTGC GGCCTACAAG CTGCTGGTGC TGTCGGATGG CCTGTGCGAC
GGCGGGCCGC TGGCCTTCAC GGTGGCGCGC TGA
 
Protein sequence
MHSTLSPWRL VHLALLASAL ALSAGASAQP APPSLQPDSG PWKSGAGFDF DLGKKKLKKT 
RQSVSGMACN LDARQQRVCL VVFDEGAQAR YASVGDKALT PAAEPVVLRA TADELDAEGA
ATDGRYFYVT GSHSAKRNDC ASNPGSRHVL RFRLDPATGR ASRAQADFAD SGRLWPIMQA
QPELAPHVGE RKCLGSEAPP EAPRLAGQQG VNIEGLAVQG GRLYFGFRGP VSKGVAQVLA
VDADALFDPQ AARDPKATIT RLALGPNRGI RDMVAVKTGL LLLAGPDDSS ASQGAGWTVA
WWDGKTAAGS VVQPRVLAAL DLSGVKLRKC DKELKPEAMT VLEETPAAYK LLVLSDGLCD
GGPLAFTVAR